RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PSMA5P28066 241 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 RGS2P41220 211 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 MAP2K5Q13163 448 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 ABRAQ8N0Z2 381 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 STAG2Q8N3U4 1231 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 IL27Q8NEV9 243 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 ARMC5Q96C12 935 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 AGBL1Q96MI9 1066 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 CPVLQ9H3G5 476 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 GRM4Q14833 912 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 BLOC1S2Q6QNY1 142 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 ZNF654Q8IZM8 581 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 TBC1D32Q96NH3 1257 aa19.53■□□□□ 0.72
SDCBP-201ENST00000260130 COL11A1P12107 1806 aaPredicted RBP19.52■□□□□ 0.72
SDCBP-201ENST00000260130 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.72
SDCBP-201ENST00000260130 KLRF2D3W0D1 207 aa19.52■□□□□ 0.72
SDCBP-201ENST00000260130 ELNP15502 786 aa19.52■□□□□ 0.72
SDCBP-201ENST00000260130 ADORA2AP29274 412 aa19.52■□□□□ 0.72
SDCBP-201ENST00000260130 SGMS1Q86VZ5 419 aa19.52■□□□□ 0.72
SDCBP-201ENST00000260130 CCDC85CA6NKD9 419 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 DDAH1O94760 285 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 ADGRF4Q8IZF3 695 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 MMP19Q99542 508 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 DOCK3Q8IZD9 2030 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 ICAM1P05362 532 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 CPA1P15085 419 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 KCTD2Q14681 263 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 DPP9Q86TI2 863 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 CHST13Q8NET6 341 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 ZNF333Q96JL9 665 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 APBA2Q99767 749 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 BIN2Q9UBW5 565 aaPredicted RBP19.51■□□□□ 0.71
SDCBP-201ENST00000260130 FBXO40Q9UH90 709 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 SLC12A7Q9Y666 1083 aa19.51■□□□□ 0.71
SDCBP-201ENST00000260130 HOXC6P09630 235 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
SDCBP-201ENST00000260130 TKFCQ3LXA3 575 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 MYL10Q9BUA6 226 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 CCPG1Q9ULG6 757 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 DHX16O60231 1041 aaKnown RBP19.5■□□□□ 0.71
SDCBP-201ENST00000260130 ALAS1P13196 640 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 TRMT44Q8IYL2 757 aaKnown RBP19.5■□□□□ 0.71
SDCBP-201ENST00000260130 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 VAT1LQ9HCJ6 419 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 HOMER2Q9NSB8 354 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 PNMA2Q9UL42 364 aa19.5■□□□□ 0.71
SDCBP-201ENST00000260130 CALM1P0DP23 149 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 CALM2P0DP24 149 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 CALM3P0DP25 149 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 RPS6KB1P23443 525 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 FGD1P98174 961 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 CTCFLQ8NI51 663 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-201ENST00000260130 TRERF1Q96PN7 1200 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 PLXNB2O15031 1838 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 COBLO75128 1261 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 KIF5BP33176 963 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 UBXN2AP68543 259 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 SYNE3Q6ZMZ3 975 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.49■□□□□ 0.71
SDCBP-201ENST00000260130 TRIB2Q92519 343 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 TM6SF1Q9BZW5 370 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 ACAD9Q9H845 621 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 ZSWIM6Q9HCJ5 1215 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 RNF146Q9NTX7 359 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 SLC5A4Q9NY91 659 aa19.49■□□□□ 0.71
SDCBP-201ENST00000260130 Q6ZUG5 572 aa19.48■□□□□ 0.71
SDCBP-201ENST00000260130 RUFY3Q7L099 469 aa19.48■□□□□ 0.71
SDCBP-201ENST00000260130 NPLOC4Q8TAT6 608 aa19.48■□□□□ 0.71
SDCBP-201ENST00000260130 HMGCRP04035 888 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 INHAP05111 366 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 CDC37Q16543 378 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-201ENST00000260130 CCL14Q16627 93 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 ANKRD35Q8N283 1001 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 MYCP01106 439 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-201ENST00000260130 PGK2P07205 417 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 RXRAP19793 462 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 ANAPC15P60006 121 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 FBXL16Q8N461 479 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 RIOX1Q9H6W3 641 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 CYP46A1Q9Y6A2 500 aa19.47■□□□□ 0.71
SDCBP-201ENST00000260130 TAL1P17542 331 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-201ENST00000260130 APOA5Q6Q788 366 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 FANCBQ8NB91 859 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 GNAQP50148 359 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 MTFR1Q15390 333 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 QRICH1Q2TAL8 776 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 MUM1L1Q5H9M0 696 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 MICU3Q86XE3 530 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 RAB11FIP4Q86YS3 637 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 CCDC144CPQ8IYA2 1237 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 MTMR8Q96EF0 704 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 FLRT1Q9NZU1 646 aa19.46■□□□□ 0.71
SDCBP-201ENST00000260130 CYTH3O43739 400 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms