RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
RIPK1-201ENST00000259808 A0A1W2PRG0 241 aa16.86■□□□□ 0.29
RIPK1-201ENST00000259808 GCOM1H8Y6P7 765 aaPredicted RBP16.86■□□□□ 0.29
RIPK1-201ENST00000259808 MYZAPP0CAP1 466 aa16.86■□□□□ 0.29
RIPK1-201ENST00000259808 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
RIPK1-201ENST00000259808 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
RIPK1-201ENST00000259808 PRKG1Q13976 671 aa16.86■□□□□ 0.29
RIPK1-201ENST00000259808 KRT31Q15323 416 aa16.86■□□□□ 0.29
RIPK1-201ENST00000259808 CCDC114Q96M63 670 aa16.86■□□□□ 0.29
RIPK1-201ENST00000259808 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
RIPK1-201ENST00000259808 DNM2P50570 870 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 E4F1Q66K89 784 aaPredicted RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 GSTA5Q7RTV2 222 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 TBCKQ8TEA7 893 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 CELF1Q92879 486 aaKnown RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 ATP6V0A2Q9Y487 856 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 H7C1D1 291 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 SPOPO43791 374 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 PTPREP23469 700 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 CACNB3P54284 484 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 SFMBT2Q5VUG0 894 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 U2AF1L4Q8WU68 220 aaKnown RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 HPS3Q969F9 1004 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 KRT5P13647 590 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 TNFAIP3P21580 790 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 LIFRP42702 1097 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 UBE2SQ16763 222 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 HOOK3Q86VS8 718 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
RIPK1-201ENST00000259808 TRIML1Q8N9V2 468 aa16.85■□□□□ 0.29
RIPK1-201ENST00000259808 LAMC1P11047 1609 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 BACH1O14867 736 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 C2orf54Q08AI8 447 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 HDAC6Q9UBN7 1215 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 EXOC3O60645 756 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 VIMP08670 466 aaKnown RBP16.84■□□□□ 0.29
RIPK1-201ENST00000259808 EPB41P11171 864 aaKnown RBP16.84■□□□□ 0.29
RIPK1-201ENST00000259808 ANTXR2P58335 489 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 ST3GAL1Q11201 340 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 CCDC155Q8N6L0 562 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 FAM204AQ9H8W3 233 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 NCOA3Q9Y6Q9 1424 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 LIG3P49916 1009 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 PPP1R7Q15435 360 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 RESP18Q5W5W9 173 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 ABCB6Q9NP58 842 aa16.84■□□□□ 0.29
RIPK1-201ENST00000259808 THRAP3Q9Y2W1 955 aaKnown RBP16.84■□□□□ 0.29
RIPK1-201ENST00000259808 FTCDO95954 541 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 PLCG1P19174 1290 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.29
RIPK1-201ENST00000259808 RPS6KA1Q15418 735 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 SARM1Q6SZW1 724 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.29
RIPK1-201ENST00000259808 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.29
RIPK1-201ENST00000259808 TTC16Q8NEE8 873 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 RABGGTAQ92696 567 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 CTTNBP2NLQ9P2B4 639 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 DNM3Q9UQ16 869 aa16.83■□□□□ 0.29
RIPK1-201ENST00000259808 ZBTB22O15209 634 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 BUB1BO60566 1050 aaPredicted RBP16.83■□□□□ 0.28
RIPK1-201ENST00000259808 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.28
RIPK1-201ENST00000259808 GUCY2DQ02846 1103 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 CCDC121Q6ZUS5 278 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 PEX26Q7Z412 305 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 RPL13P26373 211 aaKnown RBP16.83■□□□□ 0.28
RIPK1-201ENST00000259808 BIRC3Q13489 604 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 NSMFQ6X4W1 530 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 KIFC2Q96AC6 838 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 HAUS4Q9H6D7 363 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 NRKQ7Z2Y5 1582 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 SETBP1Q9Y6X0 1596 aa16.83■□□□□ 0.28
RIPK1-201ENST00000259808 NUP58Q9BVL2 599 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 GNGT1P63211 74 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 BRD3Q15059 726 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 TAB3Q8N5C8 712 aaPredicted RBP16.82■□□□□ 0.28
RIPK1-201ENST00000259808 BCAS4Q8TDM0 211 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 TFR2Q9UP52 801 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 MOCS3O95396 460 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 CCZ1BP86790 482 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 CCZ1P86791 482 aaPredicted RBP16.82■□□□□ 0.28
RIPK1-201ENST00000259808 FAM26FQ5R3K3 315 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 MGARPQ8TDB4 240 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
RIPK1-201ENST00000259808 CLIC2O15247 247 aa16.81■□□□□ 0.28
RIPK1-201ENST00000259808 CEP85LQ5SZL2 805 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms