RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LRRC41Q15345 812 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 NPY5RQ15761 445 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 HDXQ7Z353 690 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 LDHBP07195 334 aaKnown RBP15.14■□□□□ 0.01
VHL-201ENST00000256474 PLCG1P19174 1290 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 SPAG1Q07617 926 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 PFKFB3Q16875 520 aaPredicted RBP15.14■□□□□ 0.01
VHL-201ENST00000256474 TUBGCP2Q9BSJ2 902 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 DISC1Q9NRI5 854 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 RWDD2AQ9UIY3 292 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 ATRNO75882 1429 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 EIF3JO75822 258 aaKnown RBP15.14■□□□□ 0.01
VHL-201ENST00000256474 GRIK5Q16478 980 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 CABP7Q86V35 215 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 CCDC47Q96A33 483 aaKnown RBP15.14■□□□□ 0.01
VHL-201ENST00000256474 JAKMIP2Q96AA8 810 aa15.14■□□□□ 0.01
VHL-201ENST00000256474 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 NKRFO15226 690 aaKnown RBP eCLIP15.13■□□□□ 0.01
VHL-201ENST00000256474 CALML3P27482 149 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 PDXDC2PQ6P474 469 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
VHL-201ENST00000256474 NAA15Q9BXJ9 866 aaKnown RBP15.13■□□□□ 0.01
VHL-201ENST00000256474 RSPH14Q9UHP6 348 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 EP400Q96L91 3159 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 KLRF2D3W0D1 207 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 DDAH1O94760 285 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 PLEKP08567 350 aaPredicted RBP15.13■□□□□ 0.01
VHL-201ENST00000256474 PDE4CQ08493 712 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 TXNRD1Q16881 649 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
VHL-201ENST00000256474 TTC19Q6DKK2 380 aaPredicted RBP15.13■□□□□ 0.01
VHL-201ENST00000256474 SH3RF1Q7Z6J0 888 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 TMEM260Q9NX78 707 aa15.13■□□□□ 0.01
VHL-201ENST00000256474 ADAMTS7Q9UKP4 1686 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 C2orf54Q08AI8 447 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 CASP8Q14790 479 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 MB21D1Q8N884 522 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 SPATA20Q8TB22 786 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 GPCPD1Q9NPB8 672 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 BSDC1Q9NW68 430 aaPredicted RBP15.12■□□□□ 0.01
VHL-201ENST00000256474 AKR1B10O60218 316 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
VHL-201ENST00000256474 STK4Q13043 487 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 CCDC42Q96M95 316 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 LACRTQ9GZZ8 138 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 NLRC4Q9NPP4 1024 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 PCDHA4Q9UN74 947 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 COL18A1P39060 1754 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 SMCO2A6NFE2 343 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 TNNI2P48788 182 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 TXLNBQ8N3L3 684 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 CNOT6LQ96LI5 555 aaKnown RBP15.12■□□□□ 0.01
VHL-201ENST00000256474 CRACR2AQ9BSW2 395 aa15.12■□□□□ 0.01
VHL-201ENST00000256474 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 SLC7A5Q01650 507 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 PPP2R5BQ15173 497 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 SPA17Q15506 151 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 E2F4Q16254 413 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 COA7Q96BR5 231 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 IL17RBQ9NRM6 502 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 EHD2Q9NZN4 543 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 SEC63Q9UGP8 760 aaKnown RBP15.11■□□□□ 0.01
VHL-201ENST00000256474 TRIM66O15016 1216 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
VHL-201ENST00000256474 BRD3Q15059 726 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 LRRC47Q8N1G4 583 aaKnown RBP15.11■□□□□ 0.01
VHL-201ENST00000256474 SAR1BQ9Y6B6 198 aa15.11■□□□□ 0.01
VHL-201ENST00000256474 BUB1O43683 1085 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 CCDC155Q8N6L0 562 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 LRWD1Q9UFC0 647 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
VHL-201ENST00000256474 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 H7C1D1 291 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 ARHGAP25P42331 645 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 BEND6Q5SZJ8 279 aaPredicted RBP15.1■□□□□ 0.01
VHL-201ENST00000256474 CCDC181Q5TID7 509 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 MLXIPQ9HAP2 919 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 FAM53CQ9NYF3 392 aa15.1■□□□□ 0.01
VHL-201ENST00000256474 LIMA1Q9UHB6 759 aaKnown RBP15.1■□□□□ 0.01
VHL-201ENST00000256474 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 SLURP2P0DP57 97 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 NFIXQ14938 502 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 FOXR1Q6PIV2 292 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 CACNA2D4Q7Z3S7 1137 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 IRF2BP1Q8IU81 584 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 PIGSQ96S52 555 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 PCDHA6Q9UN73 950 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 REXO2Q9Y3B8 237 aaKnown RBP15.09■□□□□ 0.01
VHL-201ENST00000256474 PCDHA8Q9Y5H6 950 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 GLI3P10071 1580 aa15.09■□□□□ 0.01
VHL-201ENST00000256474 RCCD1A6NED2 376 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms