RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
CNN1-201ENST00000252456 PAK6Q9NQU5 681 aaPredicted RBP16.66■□□□□ 0.26
CNN1-201ENST00000252456 CTDP1Q9Y5B0 961 aaPredicted RBP16.66■□□□□ 0.26
CNN1-201ENST00000252456 FRMPD3Q5JV73 1810 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 DNAJC25-GNG10A0A024R161 153 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 PRC1O43663 620 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 ICAM1P05362 532 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 PGK2P07205 417 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 MCM5P33992 734 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 HSPA4P34932 840 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 TROAPQ12815 778 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 WTAPQ15007 396 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 CCDC174Q6PII3 467 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 TRMT44Q8IYL2 757 aaKnown RBP16.65■□□□□ 0.26
CNN1-201ENST00000252456 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 SHISA4Q96DD7 197 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
CNN1-201ENST00000252456 SH2B2O14492 632 aaPredicted RBP16.64■□□□□ 0.25
CNN1-201ENST00000252456 GJB1P08034 283 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
CNN1-201ENST00000252456 EN2P19622 333 aaPredicted RBP16.64■□□□□ 0.25
CNN1-201ENST00000252456 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
CNN1-201ENST00000252456 KCTD2Q14681 263 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
CNN1-201ENST00000252456 SLC35G1Q2M3R5 365 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 ZNF792Q3KQV3 632 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 DPP9Q86TI2 863 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 TMEM106CQ9BVX2 250 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 MAD2L2Q9UI95 211 aa16.64■□□□□ 0.25
CNN1-201ENST00000252456 MCM3APO60318 1980 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 ERICH2A1L162 156 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 PALM3A6NDB9 673 aaPredicted RBP16.63■□□□□ 0.25
CNN1-201ENST00000252456 REC8O95072 547 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 PARP1P09874 1014 aaKnown RBP16.63■□□□□ 0.25
CNN1-201ENST00000252456 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 RNF146Q9NTX7 359 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 BAZ2BQ9UIF8 2168 aaKnown RBP16.63■□□□□ 0.25
CNN1-201ENST00000252456 ALAS1P13196 640 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 CYP2C19P33261 490 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
CNN1-201ENST00000252456 GRM4Q14833 912 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 MUM1L1Q5H9M0 696 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 FGD4Q96M96 766 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 LRRC2Q9BYS8 371 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNN1-201ENST00000252456 FBXO40Q9UH90 709 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
CNN1-201ENST00000252456 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
CNN1-201ENST00000252456 GJA8P48165 433 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 TKFCQ3LXA3 575 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 ADGRF4Q8IZF3 695 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 U2AF1L4Q8WU68 220 aaKnown RBP16.62■□□□□ 0.25
CNN1-201ENST00000252456 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 TRERF1Q96PN7 1200 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 ACAD9Q9H845 621 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 JMJD4Q9H9V9 463 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 HMX1Q9NP08 348 aaPredicted RBP16.62■□□□□ 0.25
CNN1-201ENST00000252456 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
CNN1-201ENST00000252456 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
CNN1-201ENST00000252456 CCND3P30281 292 aaPredicted RBP16.61■□□□□ 0.25
CNN1-201ENST00000252456 LIFRP42702 1097 aa16.61■□□□□ 0.25
CNN1-201ENST00000252456 ZNF654Q8IZM8 581 aa16.61■□□□□ 0.25
CNN1-201ENST00000252456 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
CNN1-201ENST00000252456 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
CNN1-201ENST00000252456 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
CNN1-201ENST00000252456 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
CNN1-201ENST00000252456 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
CNN1-201ENST00000252456 KLRF2D3W0D1 207 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 CYBAP13498 195 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 KRT32Q14532 448 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 CDC37Q16543 378 aaPredicted RBP16.6■□□□□ 0.25
CNN1-201ENST00000252456 MFSD14CQ5VZR4 134 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 ANKRD35Q8N283 1001 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 MTMR8Q96EF0 704 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 CRISPLD2Q9H0B8 497 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 SLC5A4Q9NY91 659 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 ASTN1O14525 1302 aa16.6■□□□□ 0.25
CNN1-201ENST00000252456 NFIBO00712 420 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 CYTH3O43739 400 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 SGPL1O95470 568 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
CNN1-201ENST00000252456 CATIPQ7Z7H3 387 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 SGMS1Q86VZ5 419 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 CLEC4DQ8WXI8 215 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 DDAH1O94760 285 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 CPA1P15085 419 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms