RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SGPL1O95470 568 aa28.48■■■□□ 2.15
SDF2L1-201ENST00000248958 PRKAR2AP13861 404 aaKnown RBP28.48■■■□□ 2.15
SDF2L1-201ENST00000248958 SLC16A2P36021 539 aa28.48■■■□□ 2.15
SDF2L1-201ENST00000248958 TRIM32Q13049 653 aa28.48■■■□□ 2.15
SDF2L1-201ENST00000248958 WTAPQ15007 396 aa28.48■■■□□ 2.15
SDF2L1-201ENST00000248958 ICAM1P05362 532 aa28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 PARP1P09874 1014 aaKnown RBP28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 CACNB2Q08289 660 aaPredicted RBP28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 U2AF1L4Q8WU68 220 aaKnown RBP28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 DDX11Q96FC9 970 aa28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 ACAD9Q9H845 621 aa28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 FLRT1Q9NZU1 646 aa28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 CENPFP49454 3210 aa28.47■■■□□ 2.15
SDF2L1-201ENST00000248958 MCM5P33992 734 aa28.46■■■□□ 2.15
SDF2L1-201ENST00000248958 CCDC174Q6PII3 467 aa28.46■■■□□ 2.15
SDF2L1-201ENST00000248958 AGBL1Q96MI9 1066 aa28.46■■■□□ 2.15
SDF2L1-201ENST00000248958 TNRC18O15417 2968 aaPredicted RBP28.46■■■□□ 2.15
SDF2L1-201ENST00000248958 REC8O95072 547 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 IGHA2P01877 340 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 ZNF792Q3KQV3 632 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 ANKRD35Q8N283 1001 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 MAML3Q96JK9 1138 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 TMEM87BQ96K49 555 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 DEFB118Q96PH6 123 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 RNF146Q9NTX7 359 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 CCPG1Q9ULG6 757 aa28.45■■■□□ 2.14
SDF2L1-201ENST00000248958 GOLGA8HP0CJ92 632 aa28.44■■■□□ 2.14
SDF2L1-201ENST00000248958 TSGA10IPQ3SY00 556 aa28.44■■■□□ 2.14
SDF2L1-201ENST00000248958 TMEM67Q5HYA8 995 aa28.44■■■□□ 2.14
SDF2L1-201ENST00000248958 TMTC2Q8N394 836 aa28.44■■■□□ 2.14
SDF2L1-201ENST00000248958 TRERF1Q96PN7 1200 aa28.44■■■□□ 2.14
SDF2L1-201ENST00000248958 EPB41L2O43491 1005 aaKnown RBP28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 PGK2P07205 417 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 ALAS1P13196 640 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 ANTXR2P58335 489 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 KRT32Q14532 448 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 CHST3Q7LGC8 479 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 MSL3Q8N5Y2 521 aaKnown RBP28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 IGDCC4Q8TDY8 1250 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 WDR19Q8NEZ3 1342 aa28.43■■■□□ 2.14
SDF2L1-201ENST00000248958 DNAJC25-GNG10A0A024R161 153 aa28.42■■■□□ 2.14
SDF2L1-201ENST00000248958 SNAP25P60880 206 aa28.42■■■□□ 2.14
SDF2L1-201ENST00000248958 SHISA4Q96DD7 197 aa28.42■■■□□ 2.14
SDF2L1-201ENST00000248958 CRISPLD2Q9H0B8 497 aa28.42■■■□□ 2.14
SDF2L1-201ENST00000248958 HOMER2Q9NSB8 354 aa28.42■■■□□ 2.14
SDF2L1-201ENST00000248958 PRC1O43663 620 aa28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 TFRCP02786 760 aaKnown RBP28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 CYP2C19P33261 490 aa28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 CATIPQ7Z7H3 387 aa28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 ZNF467Q7Z7K2 595 aaPredicted RBP28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 UBA5Q9GZZ9 404 aa28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 NRBP1Q9UHY1 535 aa28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 PFASO15067 1338 aa28.41■■■□□ 2.14
SDF2L1-201ENST00000248958 MSCO60682 206 aa28.4■■■□□ 2.14
SDF2L1-201ENST00000248958 SLC34A2O95436 690 aa28.4■■■□□ 2.14
SDF2L1-201ENST00000248958 NEK1Q96PY6 1258 aa28.4■■■□□ 2.14
SDF2L1-201ENST00000248958 TINF2Q9BSI4 451 aa28.4■■■□□ 2.14
SDF2L1-201ENST00000248958 CCND3P30281 292 aaPredicted RBP28.39■■■□□ 2.14
SDF2L1-201ENST00000248958 GRM4Q14833 912 aa28.39■■■□□ 2.14
SDF2L1-201ENST00000248958 ADGRF4Q8IZF3 695 aa28.39■■■□□ 2.14
SDF2L1-201ENST00000248958 ANKLE1Q8NAG6 615 aa28.39■■■□□ 2.14
SDF2L1-201ENST00000248958 MAP3K14Q99558 947 aa28.39■■■□□ 2.14
SDF2L1-201ENST00000248958 MYH6P13533 1939 aa28.39■■■□□ 2.13
SDF2L1-201ENST00000248958 PALM3A6NDB9 673 aaPredicted RBP28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 CYBAP13498 195 aa28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 LIFRP42702 1097 aa28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 TROAPQ12815 778 aa28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 LY9Q9HBG7 655 aa28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 A1CFQ9NQ94 594 aaKnown RBP28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 MAD2L2Q9UI95 211 aa28.38■■■□□ 2.13
SDF2L1-201ENST00000248958 SMCHD1A6NHR9 2005 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 KLRF2D3W0D1 207 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 SH2B2O14492 632 aaPredicted RBP28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 DHX16O60231 1041 aaKnown RBP28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 DDAH1O94760 285 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 HMGB1P09429 215 aaKnown RBP28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 HSPA4P34932 840 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 CDC37Q16543 378 aaPredicted RBP28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 MAMDC4Q6UXC1 1216 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 KCNB2Q92953 911 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 MAF1Q9H063 256 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 SENP2Q9HC62 589 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 OGDHLQ9ULD0 1010 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 SYNGAP1Q96PV0 1343 aa28.37■■■□□ 2.13
SDF2L1-201ENST00000248958 POTEB2H3BUK9 544 aa28.36■■■□□ 2.13
SDF2L1-201ENST00000248958 CNGA1P29973 690 aa28.36■■■□□ 2.13
SDF2L1-201ENST00000248958 MUM1L1Q5H9M0 696 aa28.36■■■□□ 2.13
SDF2L1-201ENST00000248958 RASEFQ8IZ41 740 aa28.36■■■□□ 2.13
SDF2L1-201ENST00000248958 STAG2Q8N3U4 1231 aa28.36■■■□□ 2.13
SDF2L1-201ENST00000248958 FRMPD3Q5JV73 1810 aa28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 CCDC69A6NI79 296 aa28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 NFXL1Q6ZNB6 911 aa28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 DHX32Q7L7V1 743 aaKnown RBP28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 ZNF654Q8IZM8 581 aa28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 CPVLQ9H3G5 476 aa28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 DDX20Q9UHI6 824 aaKnown RBP28.35■■■□□ 2.13
SDF2L1-201ENST00000248958 FARP2O94887 1054 aaPredicted RBP28.34■■■□□ 2.13
SDF2L1-201ENST00000248958 FAM133AQ8N9E0 248 aa28.34■■■□□ 2.13
SDF2L1-201ENST00000248958 JMJD4Q9H9V9 463 aa28.34■■■□□ 2.13
SDF2L1-201ENST00000248958 CYP39A1Q9NYL5 469 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms