RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ERVK-24P63145 666 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 KIFC2Q96AC6 838 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 PDE11AQ9HCR9 933 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 C6orf50Q9HD87 102 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 GPCPD1Q9NPB8 672 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 HDAC6Q9UBN7 1215 aa14.14□□□□□ -0.15
RAB3IP-201ENST00000247833 H7C1D1 291 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 ZMYND10O75800 440 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 EIF3JO75822 258 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 CYP27A1Q02318 531 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 CCDC96Q2M329 555 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 WDR66Q8TBY9 1149 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 RRP36Q96EU6 259 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 ZNF287Q9HBT7 754 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SRGAP2O75044 1071 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SASH3O75995 380 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 NONOQ15233 471 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SPA17Q15506 151 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 ZNF804AQ7Z570 1209 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 CCDC51Q96ER9 411 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 MTRQ99707 1265 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 FAM207AQ9NSI2 230 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 BTDP43251 543 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 NFIXQ14938 502 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 NPY5RQ15761 445 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 PDXDC2PQ6P474 469 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SPATA20Q8TB22 786 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 TUBGCP2Q9BSJ2 902 aa14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAB3IP-201ENST00000247833 SEMA3EO15041 775 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 NDUFA10O95299 355 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 PMS1P54277 932 aaKnown RBP14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 MYO6Q9UM54 1294 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 TBC1D8O95759 1140 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 CYLC1P35663 651 aaPredicted RBP14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 GSTO1P78417 241 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 TXNRD1Q16881 649 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 TDRD12Q587J7 1177 aaKnown RBP14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 OR52Z1P0C646 297 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 ST5P78524 1137 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 RAD51AP2Q09MP3 1159 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 GRIK5Q16478 980 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 C12orf60Q5U649 245 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 CCDC42Q96M95 316 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 PIGSQ96S52 555 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 IL17RBQ9NRM6 502 aa14.12□□□□□ -0.15
RAB3IP-201ENST00000247833 AKR1B10O60218 316 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 FCER1AP12319 257 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 KLK7P49862 253 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 TRIM14Q14142 442 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 ARL6IP4Q66PJ3 421 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 JAKMIP2Q96AA8 810 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 CNOT6LQ96LI5 555 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 ABCB6Q9NP58 842 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 PCDHA6Q9UN73 950 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 PCDHA8Q9Y5H6 950 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 KRT86O43790 486 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 GNA11P29992 359 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 E2F4Q16254 413 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 MB21D1Q8N884 522 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 COA7Q96BR5 231 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 TBC1D7Q9P0N9 293 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 CALCOCO1Q9P1Z2 691 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 LIMA1Q9UHB6 759 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 BAZ2AQ9UIF9 1905 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 COL1A1P02452 1464 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 AMPD3Q01432 767 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 ARID5AQ03989 594 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 MFSD14BQ5SR56 506 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 TBCKQ8TEA7 893 aa14.11□□□□□ -0.15
RAB3IP-201ENST00000247833 CCDC151A5D8V7 595 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 POTEB2H3BUK9 544 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 KRT18P05783 430 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 MRPS25P82663 173 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 IKQ13123 557 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 APTXQ7Z2E3 356 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 HDXQ7Z353 690 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 REXO1Q8N1G1 1221 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 ANKRD13CQ8N6S4 541 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 TNFRSF25Q93038 417 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 TMEM260Q9NX78 707 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 TMEM266Q2M3C6 531 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 CT47A1Q5JQC4 288 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 CCDC70Q6NSX1 233 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 PNKPQ96T60 521 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 LRWD1Q9UFC0 647 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 C4AP0C0L4 1744 aa14.1□□□□□ -0.15
RAB3IP-201ENST00000247833 C4BP0C0L5 1744 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms