RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ECM2O94769 699 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 CD4P01730 458 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 RB1P06400 928 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 C6orf222P0C671 652 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 SRGAP2BP0DMP2 458 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 TNFAIP2Q03169 654 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 SKIV2LQ15477 1246 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 CCSAPQ6IQ19 270 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 KCNV1Q6PIU1 500 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 BMP8AQ7Z5Y6 402 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 GMCL1P1Q8NEA9 526 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ATG4CQ96DT6 458 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 LRFN3Q9BTN0 628 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 NOC4LQ9BVI4 516 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 DNAJC18Q9H819 358 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 A0A0G2JMZ2 1700 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 RLFQ13129 1914 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 DNAJC25-GNG10A0A024R161 153 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 COBLO75128 1261 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 GABBR2O75899 941 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PCP11498 1178 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SEPT2Q15019 361 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 KCNA10Q16322 511 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 C16orf86Q6ZW13 317 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 KLHDC4Q8TBB5 520 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 MORC4Q8TE76 937 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 TNPO1Q92973 898 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 MKL1Q969V6 931 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 FAM161BQ96MY7 647 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PRDM12Q9H4Q4 367 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PALD1Q9ULE6 856 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 NOD1Q9Y239 953 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PLIN4Q96Q06 1357 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ZBBXA8MT70 800 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SURF6O75683 361 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PDE4BQ07343 736 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 NAALADL2Q58DX5 795 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SESTD1Q86VW0 696 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 RGS22Q8NE09 1264 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 KIF1BPQ96EK5 621 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 CRBNQ96SW2 442 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 DNAJC2Q99543 621 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 NKX2-4Q9H2Z4 354 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 FLRT1Q9NZU1 646 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 DAXXQ9UER7 740 aaPredicted RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PLXNB2O15031 1838 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF536O15090 1300 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 DCXO43602 365 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ASGR1P07306 291 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ITGA7Q13683 1181 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 FSCN1Q16658 493 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SNRNP48Q6IEG0 339 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 CNKSR3Q6P9H4 555 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 TRMT2AQ8IZ69 625 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SCFD2Q8WU76 684 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 STAG1Q8WVM7 1258 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 FERMT2Q96AC1 680 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 CLUAP1Q96AJ1 413 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 TGS1Q96RS0 853 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ATAD5Q96QE3 1844 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 RBM47A0AV96 593 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SMIM22K7EJ46 135 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 IFIT2P09913 472 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 PDE6AP16499 860 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 DUSP28Q4G0W2 176 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ODR4Q5SWX8 454 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ARMCX2Q7L311 632 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 CCDC84Q86UT8 332 aaPredicted RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 GMCL1Q96IK5 515 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 RIOK1Q9BRS2 568 aaKnown RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 SLC38A10Q9HBR0 1119 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF214Q9UL59 606 aaPredicted RBP2.73□□□□□ -1.97
PRKD3-201ENST00000234179 COG6Q9Y2V7 657 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 FRMPD3Q5JV73 1810 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 WDR19Q8NEZ3 1342 aa2.73□□□□□ -1.97
PRKD3-201ENST00000234179 FAM196BA6NMK8 535 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 AMHP03971 560 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ERVK-21P61565 698 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 C12orf60Q5U649 245 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 NOL8Q76FK4 1167 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 HERC6Q8IVU3 1022 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF444Q8N0Y2 327 aaPredicted RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 GJD3Q8N144 294 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 FAM133AQ8N9E0 248 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ACER1Q8TDN7 264 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 APBB2Q92870 758 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 RAD9AQ99638 391 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 SEMA4AQ9H3S1 761 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 DCP1AQ9NPI6 582 aaPredicted RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MAP3K20Q9NYL2 800 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 COL4A6Q14031 1691 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 BMP3P12645 472 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 ZAP70P43403 619 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 TMEM132BQ14DG7 1078 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 TLK2Q86UE8 772 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 FTSJ3Q8IY81 847 aaKnown RBP2.72□□□□□ -1.97
PRKD3-201ENST00000234179 MICALL1Q8N3F8 863 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 FBXO22Q8NEZ5 403 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 REPS2Q8NFH8 660 aa2.72□□□□□ -1.97
PRKD3-201ENST00000234179 DNERQ8NFT8 737 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms