RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SYCP3Q8IZU3 236 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 SYT15Q9BQS2 421 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 JADE2Q9NQC1 790 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 TFR2Q9UP52 801 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 IDEP14735 1019 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 ATP2A2P16615 1042 aaKnown RBP14.43□□□□□ -0.1
MSH2-201ENST00000233146 KIF23Q02241 960 aaPredicted RBP14.43□□□□□ -0.1
MSH2-201ENST00000233146 KIAA0753Q2KHM9 967 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 FKBP15Q5T1M5 1219 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 BACH1O14867 736 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 SEMA3EO15041 775 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 NQO1P15559 274 aaKnown RBP14.42□□□□□ -0.1
MSH2-201ENST00000233146 TMOD1P28289 359 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 CDC25AP30304 524 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 CPLX4Q7Z7G2 160 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 MAIP1Q8WWC4 291 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
MSH2-201ENST00000233146 ARHGEF10LQ9HCE6 1279 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.42□□□□□ -0.1
MSH2-201ENST00000233146 SNX12Q9UMY4 172 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 LRRC42Q9Y546 428 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 ORC4O43929 436 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 PPARAQ07869 468 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 SEPT2Q15019 361 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 CC2D2BQ6DHV5 1058 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 ANKRD24Q8TF21 1146 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 GDF3Q9NR23 364 aa14.42□□□□□ -0.1
MSH2-201ENST00000233146 PHF20L1A8MW92 1017 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 KRT9P35527 623 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 TRIM14Q14142 442 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 AACSQ86V21 672 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 CCDC197Q8NCU1 140 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 SMCR8Q8TEV9 937 aaPredicted RBP14.41□□□□□ -0.1
MSH2-201ENST00000233146 NUP88Q99567 741 aaPredicted RBP14.41□□□□□ -0.1
MSH2-201ENST00000233146 CABP1Q9NZU7 370 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 NCAPD2Q15021 1401 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 KRT86O43790 486 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 ALDH5A1P51649 535 aaPredicted RBP14.41□□□□□ -0.1
MSH2-201ENST00000233146 PSMC4P43686 418 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 CARSP49589 748 aaKnown RBP14.41□□□□□ -0.1
MSH2-201ENST00000233146 INHBCP55103 352 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 DEUP1Q05D60 604 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 CMPK2Q5EBM0 449 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 IFT20Q8IY31 132 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
MSH2-201ENST00000233146 PHACTR1Q9C0D0 580 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 NFU1Q9UMS0 254 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 MAP3K15Q6ZN16 1313 aa14.41□□□□□ -0.1
MSH2-201ENST00000233146 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 PRLRP16471 622 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 TMEM62Q0P6H9 643 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 RINLQ6ZS11 566 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 PRCCQ92733 491 aaPredicted RBP14.4□□□□□ -0.1
MSH2-201ENST00000233146 LRRC10BA6NIK2 292 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 PENKP01210 267 aaPredicted RBP14.4□□□□□ -0.1
MSH2-201ENST00000233146 KCNJ2P63252 427 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 ZRSR2Q15696 482 aaKnown RBP14.4□□□□□ -0.1
MSH2-201ENST00000233146 LRIG3Q6UXM1 1119 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 IFT43Q96FT9 208 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 ZRANB1Q9UGI0 708 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 PLAAQ9Y263 795 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 RFX7Q2KHR2 1363 aa14.4□□□□□ -0.1
MSH2-201ENST00000233146 POLE2P56282 527 aa14.4□□□□□ -0.11
MSH2-201ENST00000233146 ITIH4Q14624 930 aa14.4□□□□□ -0.11
MSH2-201ENST00000233146 APBB1IPQ7Z5R6 666 aaPredicted RBP14.4□□□□□ -0.11
MSH2-201ENST00000233146 MAP3K14Q99558 947 aa14.4□□□□□ -0.11
MSH2-201ENST00000233146 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.11
MSH2-201ENST00000233146 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.4□□□□□ -0.11
MSH2-201ENST00000233146 GJB4Q9NTQ9 266 aa14.4□□□□□ -0.11
MSH2-201ENST00000233146 ATXN10Q9UBB4 475 aa14.4□□□□□ -0.11
MSH2-201ENST00000233146 CNOT8Q9UFF9 292 aaKnown RBP14.4□□□□□ -0.11
MSH2-201ENST00000233146 AGAP1Q9UPQ3 857 aa14.4□□□□□ -0.11
MSH2-201ENST00000233146 MATR3P43243 847 aaKnown RBP eCLIP14.39□□□□□ -0.11
MSH2-201ENST00000233146 KRT83P78385 493 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 LMNTD2Q8IXW0 634 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 KIFAP3Q92845 792 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 AATFQ9NY61 560 aaKnown RBP eCLIP14.39□□□□□ -0.11
MSH2-201ENST00000233146 MYH7P12883 1935 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
MSH2-201ENST00000233146 RCCD1A6NED2 376 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 PPP2R2AP63151 447 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 SULT6B1Q6IMI4 303 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 C8orf74Q6P047 294 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 SPATA20Q8TB22 786 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 BOLA2Q9H3K6 86 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 PLCB1Q9NQ66 1216 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 GALNT8Q9NY28 637 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 ADAM22Q9P0K1 906 aa14.39□□□□□ -0.11
MSH2-201ENST00000233146 GCOM1H8Y6P7 765 aaPredicted RBP14.38□□□□□ -0.11
MSH2-201ENST00000233146 MYZAPP0CAP1 466 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 SP100P23497 879 aaPredicted RBP14.38□□□□□ -0.11
MSH2-201ENST00000233146 CUL4BQ13620 913 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 TRIM68Q6AZZ1 485 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 ANKS4BQ8N8V4 417 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 TRAPPC9Q96Q05 1148 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms