RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 APBA2Q99767 749 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-201ENST00000230480 CYTH3O43739 400 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 ZBED4O75132 1171 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 HMGCRP04035 888 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 CCND3P30281 292 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-201ENST00000230480 CCDC96Q2M329 555 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 CLEC4DQ8WXI8 215 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 MTMR8Q96EF0 704 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
VEGFA-201ENST00000230480 IFIT3O14879 490 aaKnown RBP16.09■□□□□ 0.17
VEGFA-201ENST00000230480 PRC1O43663 620 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-201ENST00000230480 SEC24BO95487 1268 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 GJB1P08034 283 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 CPA1P15085 419 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 CYP2C19P33261 490 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 GRM4Q14833 912 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 LHX8Q68G74 356 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 CCDC174Q6PII3 467 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 TCEANC2Q96MN5 208 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 PURBQ96QR8 312 aaKnown RBP16.09■□□□□ 0.17
VEGFA-201ENST00000230480 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 CRISPLD2Q9H0B8 497 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 KAT14Q9H8E8 782 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 JMJD4Q9H9V9 463 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
VEGFA-201ENST00000230480 CEP290O15078 2479 aa16.09■□□□□ 0.17
VEGFA-201ENST00000230480 ICAM1P05362 532 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 FDX1P10109 184 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 FCER1AP12319 257 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.16
VEGFA-201ENST00000230480 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 ADGRF4Q8IZF3 695 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 MMP19Q99542 508 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
VEGFA-201ENST00000230480 A1CFQ9NQ94 594 aaKnown RBP16.08■□□□□ 0.16
VEGFA-201ENST00000230480 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 OPLAHO14841 1288 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 CYBAP13498 195 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
VEGFA-201ENST00000230480 GJA8P48165 433 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 TRDNQ13061 729 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 TMEM67Q5HYA8 995 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
VEGFA-201ENST00000230480 FAM133AQ8N9E0 248 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 CHST13Q8NET6 341 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.164e-7■■■■□ 24.3
VEGFA-201ENST00000230480 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
VEGFA-201ENST00000230480 NFIBO00712 420 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 SGPL1O95470 568 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-201ENST00000230480 MCM5P33992 734 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 WTAPQ15007 396 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
VEGFA-201ENST00000230480 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
VEGFA-201ENST00000230480 U2AF1L4Q8WU68 220 aaKnown RBP16.06■□□□□ 0.16
VEGFA-201ENST00000230480 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 NEK1Q96PY6 1258 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 HOMER2Q9NSB8 354 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 BIN2Q9UBW5 565 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-201ENST00000230480 DIS3Q9Y2L1 958 aaKnown RBP16.06■□□□□ 0.16
VEGFA-201ENST00000230480 IVNS1ABPQ9Y6Y0 642 aa16.06■□□□□ 0.16
VEGFA-201ENST00000230480 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 PARP1P09874 1014 aaKnown RBP16.05■□□□□ 0.16
VEGFA-201ENST00000230480 ALAS1P13196 640 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-201ENST00000230480 LIFRP42702 1097 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 UBXN2AP68543 259 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 ASPRV1Q53RT3 343 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 SGMS1Q86VZ5 419 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
VEGFA-201ENST00000230480 FAM217BQ9NTX9 383 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-201ENST00000230480 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
VEGFA-201ENST00000230480 WDR19Q8NEZ3 1342 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 ZNF865P0CJ78 1059 aaPredicted RBP16.04■□□□□ 0.16
VEGFA-201ENST00000230480 RXRAP19793 462 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 COPB2P35606 906 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 IKQ13123 557 aaPredicted RBP16.04■□□□□ 0.16
VEGFA-201ENST00000230480 KCTD2Q14681 263 aa16.04■□□□□ 0.16
VEGFA-201ENST00000230480 TKFCQ3LXA3 575 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms