RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 DNM1LO00429 736 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 KDM4AO75164 1064 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 SYN1P17600 705 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 ATN1P54259 1190 aaPredicted RBP16.74■□□□□ 0.27
GPN3-201ENST00000228827 TRERF1Q96PN7 1200 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 ACAD9Q9H845 621 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 ZNF865P0CJ78 1059 aaPredicted RBP16.73■□□□□ 0.27
GPN3-201ENST00000228827 SYDE2Q5VT97 1194 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
GPN3-201ENST00000228827 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 LENG1Q96BZ8 264 aaPredicted RBP16.73■□□□□ 0.27
GPN3-201ENST00000228827 NRBP1Q9UHY1 535 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 KBTBD13C9JR72 458 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 SNAI1O95863 264 aaPredicted RBP16.73■□□□□ 0.27
GPN3-201ENST00000228827 PDHBP11177 359 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 CHMLP26374 656 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 MUM1L1Q5H9M0 696 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 TTC14Q96N46 770 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
GPN3-201ENST00000228827 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
GPN3-201ENST00000228827 SYNGAP1Q96PV0 1343 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 RARBP10826 455 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 CNTN2Q02246 1040 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 ZNF543Q08ER8 600 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 MSL3Q8N5Y2 521 aaKnown RBP16.72■□□□□ 0.27
GPN3-201ENST00000228827 FGD4Q96M96 766 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 RANBP17Q9H2T7 1088 aaKnown RBP16.72■□□□□ 0.27
GPN3-201ENST00000228827 A1CFQ9NQ94 594 aaKnown RBP16.72■□□□□ 0.27
GPN3-201ENST00000228827 XPNPEP3Q9NQH7 507 aa16.72■□□□□ 0.27
GPN3-201ENST00000228827 RAD50Q92878 1312 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 PGK1P00558 417 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 ICAM1P05362 532 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 GOLGA8HP0CJ92 632 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 AKR1A1P14550 325 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 LRRC41Q15345 812 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 MAMDC4Q6UXC1 1216 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 BTNL9Q6UXG8 535 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 ZNF467Q7Z7K2 595 aaPredicted RBP16.71■□□□□ 0.27
GPN3-201ENST00000228827 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
GPN3-201ENST00000228827 ZSCAN10Q96SZ4 725 aaPredicted RBP16.71■□□□□ 0.27
GPN3-201ENST00000228827 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.71■□□□□ 0.27
GPN3-201ENST00000228827 ADCYAP1R1P41586 468 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
GPN3-201ENST00000228827 PTH1RQ03431 593 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 ARMCX2Q7L311 632 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 CCDC144CPQ8IYA2 1237 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 PRO3102Q9H379 93 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 KAT14Q9H8E8 782 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
GPN3-201ENST00000228827 TNKSO95271 1327 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 RTP1P59025 263 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 CCDC178Q5BJE1 867 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 KRT23Q9C075 422 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 FAM184BQ9ULE4 1060 aa16.69■□□□□ 0.26
GPN3-201ENST00000228827 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
GPN3-201ENST00000228827 MAGEA10P43363 369 aaPredicted RBP16.68■□□□□ 0.26
GPN3-201ENST00000228827 SLC39A5Q6ZMH5 540 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 SKAP1Q86WV1 359 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
GPN3-201ENST00000228827 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 FRMPD3Q5JV73 1810 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 ALPK3Q96L96 1907 aa16.68■□□□□ 0.26
GPN3-201ENST00000228827 NFIBO00712 420 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 NT5C2P49902 561 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 RNF180Q86T96 592 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 PURBQ96QR8 312 aaKnown RBP16.67■□□□□ 0.26
GPN3-201ENST00000228827 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 SGSM2O43147 1006 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 ADCY6O43306 1168 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 CYP21A2P08686 494 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 CCDC144BQ3MJ40 725 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
GPN3-201ENST00000228827 CYB5R4Q7L1T6 521 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
GPN3-201ENST00000228827 GDF15Q99988 308 aa16.67■□□□□ 0.26
GPN3-201ENST00000228827 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
GPN3-201ENST00000228827 ASTN1O14525 1302 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 SYNRGQ9UMZ2 1314 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 ASB14A6NK59 587 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms