RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
VPS18-201ENST00000220509 TADA3O75528 432 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.53
VPS18-201ENST00000220509 SERPINB2P05120 415 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 PARP1P09874 1014 aaKnown RBP11.77□□□□□ -0.53
VPS18-201ENST00000220509 MATR3P43243 847 aaKnown RBP eCLIP11.77□□□□□ -0.53
VPS18-201ENST00000220509 INHBEP58166 350 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 POSTNQ15063 836 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 GPR161Q8N6U8 529 aaKnown RBP11.77□□□□□ -0.53
VPS18-201ENST00000220509 TRIML1Q8N9V2 468 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 CMA1P23946 247 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
VPS18-201ENST00000220509 AMPD3Q01432 767 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 E2F5Q15329 346 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 SUGP1Q8IWZ8 645 aaKnown RBP11.76□□□□□ -0.53
VPS18-201ENST00000220509 IQCGQ9H095 443 aaKnown RBP11.76□□□□□ -0.53
VPS18-201ENST00000220509 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
VPS18-201ENST00000220509 TCP10Q12799 353 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 NFIXQ14938 502 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS18-201ENST00000220509 GPKOWQ92917 476 aaPredicted RBP eCLIP11.76□□□□□ -0.53
VPS18-201ENST00000220509 BICD1Q96G01 975 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 PYM1Q9BRP8 204 aaKnown RBP11.76□□□□□ -0.53
VPS18-201ENST00000220509 BLZF1Q9H2G9 400 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 PSMA7O14818 248 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 NTSR2O95665 410 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 SLC39A14Q15043 492 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 DIXDC1Q155Q3 683 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 TDRD12Q587J7 1177 aaKnown RBP11.76□□□□□ -0.53
VPS18-201ENST00000220509 TOGARAM2Q6ZUX3 1019 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 HDXQ7Z353 690 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 RMND1Q9NWS8 449 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 RABL2BQ9UNT1 228 aa11.76□□□□□ -0.53
VPS18-201ENST00000220509 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
VPS18-201ENST00000220509 PDCD2Q16342 344 aaPredicted RBP11.75□□□□□ -0.53
VPS18-201ENST00000220509 CLEC4GQ6UXB4 293 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 NME8Q8N427 588 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
VPS18-201ENST00000220509 VPS16Q9H269 839 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 PCDHA5Q9Y5H7 936 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 GNA11P29992 359 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 MTF1Q14872 753 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 RUFY1Q96T51 708 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 NEDD4P46934 1319 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 PYGLP06737 847 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 CCDC175P0C221 793 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 LMNB1P20700 586 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 PRDX5P30044 214 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 SPA17Q15506 151 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 CCDC40Q4G0X9 1142 aa11.75□□□□□ -0.53
VPS18-201ENST00000220509 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 H3BQF6 201 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 ARHGAP6O43182 974 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 KLRK1P26718 216 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 TCERG1LQ5VWI1 586 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 TSG101Q99816 390 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 YIPF2Q9BWQ6 316 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 SEPT11Q9NVA2 429 aaKnown RBP11.74□□□□□ -0.53
VPS18-201ENST00000220509 GUCA1BQ9UMX6 200 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 ELF1P32519 619 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 DOK7Q18PE1 504 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 TRIM42Q8IWZ5 723 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 MB21D2Q8IYB1 491 aaPredicted RBP11.74□□□□□ -0.53
VPS18-201ENST00000220509 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS18-201ENST00000220509 FAM204AQ9H8W3 233 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
VPS18-201ENST00000220509 CTNND2Q9UQB3 1225 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 USP17L8P0C7I0 530 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 TXKP42681 527 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 RPS6KA3P51812 740 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
VPS18-201ENST00000220509 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 CUL5Q93034 780 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 L2HGDHQ9H9P8 463 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 ABCB6Q9NP58 842 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 CACNA1FO60840 1977 aa11.74□□□□□ -0.53
VPS18-201ENST00000220509 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 CCNT1O60563 726 aaKnown RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 SNUPNO95149 360 aaKnown RBP11.73□□□□□ -0.53
VPS18-201ENST00000220509 SCNN1DP51172 638 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 KIAA0825Q8IV33 1275 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 RASGRP4Q8TDF6 673 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 EEF2KMTQ96G04 330 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 FAXDC2Q96IV6 333 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 EYA3Q99504 573 aa11.73□□□□□ -0.53
VPS18-201ENST00000220509 A0A1W2PQ27 194 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms