RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Gm10378F6XQQ1 160 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Ccdc162pQ0VG85 912 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Fhdc1Q3ULZ2 1149 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Pcdhb14Q6PB90 796 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Apol10aQ8CCA5 318 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Znf467Q8JZL0 594 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Plekhg6Q8R0J1 787 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Slc12a8Q8VI23 705 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Smtnl1Q99LM3 459 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 Luc7lQ9CYI4 371 aaKnown RBP12□□□□□ -0.49
Msh3-202ENSMUST00000185852 AacsQ9D2R0 672 aa12□□□□□ -0.49
Msh3-202ENSMUST00000185852 GssP51855 474 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Mapk4Q6P5G0 583 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Gm2163Q6PCY5 473 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 LdhdQ7TNG8 484 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Traf3ip3Q8C0G2 513 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Mis18aQ9CZJ6 204 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cyp2s1Q9DBX6 501 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Znf541Q0GGX2 1363 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Frmd7A2AD83 703 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Lmnb1P14733 588 aaKnown RBP11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Art2aP17981 287 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cdh15P33146 784 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Ifih1Q8R5F7 1025 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Snrnp35Q9D384 244 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Kcna1P16388 495 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Rtkn2Q14B46 604 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Skor1Q8BX46 964 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Fermt2Q8CIB5 680 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cd2apQ9JLQ0 637 aa11.99□□□□□ -0.49
Msh3-202ENSMUST00000185852 Flvcr1B2RXV4 560 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Xxylt1Q3U4G3 392 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Rnf187Q8BFX1 236 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Acat1Q8QZT1 424 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Rfc4Q99J62 364 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Pfkfb3A7UAK5 555 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Zfp781Q0P5U5 243 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 GmpsQ3THK7 693 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Eif3j2Q66JS6 263 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 VmacQ8BP01 174 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Apbb1ipQ8R5A3 670 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Mtmr4Q91XS1 1190 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Acsl3Q9CZW4 720 aaKnown RBP11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Znf394Q9Z1D9 521 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Kif1aP33173 1695 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Pik3c2aQ61194 1686 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Axin2O88566 840 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cap1P40124 474 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 MbipQ99LQ1 341 aa11.98□□□□□ -0.49
Msh3-202ENSMUST00000185852 Tns2Q8CGB6 1400 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Rimbp3Q3V0F0 1606 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Spef2Q8C9J3 1734 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 4930523C07RikE9Q2T4 99 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Swap70Q6A028 585 aaKnown RBP11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Tor4aQ8BH02 426 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Ankk1Q8BZ25 745 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Mknk2Q8CDB0 459 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cbx6Q9DBY5 414 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cntnap1O54991 1385 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Flt1P35969 1333 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Arhgef10lA2AWP8 1280 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Tspyl3Q3UYP3 334 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Akap4Q60662 849 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Naa35Q6PHQ8 725 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Bcs1lQ9CZP5 418 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 TbcbQ9D1E6 244 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Cetn3O35648 167 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Epb41l2O70318 988 aaKnown RBP11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Hmgb1P63158 215 aaKnown RBP11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 NyxP83503 476 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 RragaQ80X95 313 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Nfat5Q9WV30 1534 aa11.97□□□□□ -0.49
Msh3-202ENSMUST00000185852 Samsn1P57725 372 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Mmp20P57748 482 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 SpidrQ8BGX7 933 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Tspyl4Q8VD63 406 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 MicalclQ9D5U9 680 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Krt34Q9D646 392 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Elf2Q9JHC9 593 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Prg3Q9JL95 222 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Nr1i2O54915 431 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Serpinc1P32261 465 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Ccdc42Q5SV66 316 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Stxbp3Q60770 592 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Trak2Q6P9N8 913 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Gprasp2Q8BUY8 826 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 MlphQ91V27 590 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Gpr108Q91WD0 569 aa11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Apobec3Q99J72 440 aaKnown RBP11.96□□□□□ -0.49
Msh3-202ENSMUST00000185852 Ap1b1O35643 943 aaKnown RBP11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 EgfrQ01279 1210 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Cnot7Q60809 285 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Krt14Q61781 484 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Atp1a2Q6PIE5 1020 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Fbxo10Q7TQF2 950 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Lrrc45Q8CIM1 670 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Dppa3Q8QZY3 150 aa11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Add3Q9QYB5 706 aaKnown RBP11.96□□□□□ -0.5
Msh3-202ENSMUST00000185852 Pabpc1lA2A5N3 607 aaKnown RBP11.95□□□□□ -0.5
Msh3-202ENSMUST00000185852 Map7d2A2AG50 781 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms