RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Map2P20357 1828 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Col22a1E9Q7P1 1613 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ubr1O70481 1757 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Cul4bA2A432 970 aaKnown RBP8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 PparaP23204 468 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Flt3Q00342 1000 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Smarcad1Q04692 1021 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Txndc16Q7TN22 820 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Csrnp2Q8BGQ2 534 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Fbxo38Q8BMI0 1194 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Bola3Q8CEI1 110 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Farp2Q91VS8 1065 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Syce1Q9D495 329 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ccdc89Q9DA73 370 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Zbtb43Q9DAI4 467 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Cul3Q9JLV5 768 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Dnajc7Q9QYI3 494 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Kiaa0232Q80U59 1396 aaKnown RBP8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Gm5934D3Z4U6 212 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Akr1b10G5E895 316 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Cyp26a1O55127 497 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 GpiP06745 558 aaKnown RBP8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Gnat1P20612 350 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Aimp1P31230 310 aaKnown RBP8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ltv1Q6NSQ7 470 aaKnown RBP8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Tmco6Q8BQX5 494 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Caps2Q8BUG5 550 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Tsnaxip1Q99P25 704 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Rnf4Q9QZS2 194 aa8.26□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Shank2Q80Z38 1476 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 D430041D05RikF6ZGR6 1678 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Gm21698A0A087WQP8 267 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Tbc1d8bA3KGB4 1114 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Gm382B1AXN3 1250 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Fam186bD3Z420 943 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Becn2P0DM65 447 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ighmbp2P40694 993 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Kiaa1468Q148V7 1216 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Prl2c1Q5SVL9 228 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Exoc3Q6KAR6 755 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ppp1r37Q8BKR5 712 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 HhatQ8BMT9 499 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ccdc28bQ8CEG5 200 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Lsm14bQ8CGC4 385 aaKnown RBP8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Eps8l2Q99K30 729 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Pold4Q9CWP8 107 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Arl2bpQ9D385 163 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 C5P06684 1680 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Nova2D3YVV7 556 aaKnown RBP8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Vmn2r78K7N6U5 853 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Nedd9O35177 833 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Foxp1P58462 705 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Esyt3Q5DTI8 891 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Sema4bQ62179 823 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Zranb3Q6NZP1 1069 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Smarca1Q6PGB8 1046 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 SrlQ7TQ48 910 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Klhl29Q80T74 875 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Anapc5Q8BTZ4 740 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Tmem266Q8BZB3 538 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Spice1Q8C804 860 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 4933428M09RikQ9D3X3 192 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Pus3Q9JI38 481 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Wnk3Q80XP9 1757 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 CpdO89001 1377 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Atp8b5A3FIN4 1183 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Krt90E9Q1Z0 538 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Gm6583E9Q8Z1 469 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 ChkbO55229 394 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Acsbg2Q2XU92 667 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Cyp7b1Q60991 507 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Adck2Q6NSR3 617 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Stk38lQ7TSE6 464 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 WhrnQ80VW5 918 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Eif2aQ8BJW6 581 aaKnown RBP8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 H6pdQ8CFX1 789 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Rbm41Q8JZV4 413 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Thoc1Q8R3N6 657 aaKnown RBP8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Caap1Q8VDY9 356 aa8.25□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Col20a1Q923P0 1320 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Lmnb2P21619 596 aaKnown RBP8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 NpeppsQ11011 920 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Triml1Q8BVP1 470 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Psmd2Q8VDM4 908 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 GckrQ91X44 587 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Rnf34Q99KR6 376 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ccdc105Q9D4K7 499 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Rpf2Q9JJ80 306 aaKnown RBP8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Pkd2l2Q9JLG4 621 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Fam50bQ9WTJ8 334 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Cul1Q9WTX6 776 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Snx1Q9WV80 522 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Plcb1Q9Z1B3 1216 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 C3P01027 1663 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Als2Q920R0 1651 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Il7P10168 154 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 RaraP11416 462 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Stmn4P63042 189 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Ccdc129Q14B48 1034 aa8.24□□□□□ -1.09
Bdnf-204ENSMUST00000111044 Nlrp1aQ2LKU9 1182 aa8.24□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms