RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Abl2Q4JIM5 1182 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Zbed4Q80WQ9 1168 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Smndc1Q8BGT7 238 aaKnown RBP12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Arhgef6Q8K4I3 771 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ccdc65Q8VHI7 493 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Brinp3Q499E0 766 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Luc7l3Q5SUF2 432 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Klra7Q60654 280 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Chmp2bQ8BJF9 213 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ankk1Q8BZ25 745 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Abcf2Q99LE6 628 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Pold4Q9CWP8 107 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cul4bA2A432 970 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Gm382B1AXN3 1250 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Becn2P0DM65 447 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cracr2aQ3UP38 310 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Tmprss11aQ3UQ41 389 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Dnajc8Q6NZB0 253 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nek11Q8C0Q4 628 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ddx54Q8K4L0 874 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Mrps9Q9D7N3 390 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cbx6Q9DBY5 414 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Msh5Q9QUM7 833 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Phlpp1Q8CHE4 1687 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cdhr2E9Q7P9 1308 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Gm43638A0A0J9YU36 694 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cfap99A0A140LIX9 648 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nek1P51954 1203 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cct6aP80317 531 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Fhdc1Q3ULZ2 1149 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Gja3Q64448 417 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ppp2r5aQ6PD03 486 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 R3hdm2Q80TM6 1044 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cys1Q8R4T1 145 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Lrrfip2Q91WK0 415 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 StrbpQ91WM1 672 aaKnown RBP12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Atp6v0a4Q920R6 833 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Fam213aQ9CYH2 218 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Mphosph6Q9D1Q1 161 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Fam217aQ9D9W6 419 aa12.69□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nab2Q61127 525 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Prpf4bQ61136 1007 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Rps6kc1Q8BLK9 1056 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Rpa1Q8VEE4 623 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Vwa5aQ99KC8 793 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Dbndd2Q9CRD4 158 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Cap2Q9CYT6 476 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Pus3Q9JI38 481 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ltb4r2Q9JJL9 360 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Pkd2l2Q9JLG4 621 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ecel1Q9JMI0 775 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Hmg20bQ9Z104 317 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Kif5cP28738 956 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nlrp1aQ2LKU9 1182 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Rnf220Q6PDX6 566 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nxf7Q80SZ6 620 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 F13a1Q8BH61 732 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 3830417A13RikQ8BQJ2 303 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 NemfQ8CCP0 1064 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nxnl2Q9D531 156 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Plscr1Q9JJ00 328 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Itgb1bp2Q9R000 350 aa12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Acot9Q9R0X4 439 aaKnown RBP12.68□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Col18a1P39061 1774 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Wnk3Q80XP9 1757 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Alox12eP55249 662 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Fam207aP58468 219 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 NpeppsQ11011 920 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Slc38a10Q5I012 1090 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ddx3xQ62167 662 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Prpf38bQ80SY5 542 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Lmbrd2Q8C561 694 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Q8C6G1 249 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Lin7aQ8JZS0 233 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Tdrd7Q8K1H1 1086 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Usp15Q8R5H1 981 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Lzts2Q91YU6 671 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Senp2Q91ZX6 588 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ddx47Q9CWX9 455 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Mfap3lQ9D3X9 409 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Fam84aQ9D650 292 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Trp53inp1Q9QXE4 239 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 InhbeO08717 350 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Nck2O55033 380 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Atp2a2O55143 1044 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Klc1O88447 541 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Myl1P05977 188 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Traf5P70191 558 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Gm12185Q5NCB2 835 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 NfkbibQ60778 359 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Stk38lQ7TSE6 464 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Sptlc3Q8BG54 563 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Tubgcp2Q921G8 905 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ccdc43Q9CR29 222 aaKnown RBP12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Gucy1a3Q9ERL9 691 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Gm28360A0A087WR25 190 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ercc5P35689 1170 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Rhpn1Q61085 643 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Skor1Q8BX46 964 aa12.67□□□□□ -0.38
Ssh1-201ENSMUST00000077689 GptQ8QZR5 496 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms