RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gml2G5E8L7 176 aa28.41■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Cplx2P84086 134 aa28.41■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Atp9bP98195 1146 aa28.41■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Oxr1Q4KMM3 866 aa28.41■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Lama2Q60675 3118 aaKnown RBP28.41■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Aoc2Q812C9 757 aa28.41■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Gjb1P28230 283 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Gdf10P97737 476 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Rhpn1Q61085 643 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Pof1bQ8K4L4 587 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Usp26Q99MX1 835 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Gm20425E9Q035 978 aaKnown RBP28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Gm13128L7MU96 475 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 SrprbP47758 269 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 YdjcQ14BV6 310 aa28.4■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 AoahO35298 574 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Rabep1O35551 862 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Hoxc6P10629 235 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 TxnP10639 105 aaKnown RBP28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Siah1bQ06985 282 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Zdhhc15Q8BGJ0 337 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Alg3Q8K2A8 438 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Onecut3Q8K557 490 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 AllcQ9JHX6 414 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Tmem191cQ9JJB1 302 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Fem1bQ9Z2G0 627 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Psmd10Q9Z2X2 231 aa28.39■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Ppm1jQ149T7 507 aa28.38■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Dlk2Q8K1E3 382 aa28.38■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Prpf3Q922U1 683 aaKnown RBP28.38■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Galntl5Q9D4M9 431 aa28.38■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 MthfslL7N466 203 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Map2k1P31938 393 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 NfibP97863 570 aaKnown RBP28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Fscn2Q32M02 492 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Miga1Q4QQM5 600 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Nim1kQ8BHI9 436 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Hsdl1Q8BTX9 330 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Cyp27a1Q9DBG1 533 aa28.37■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Fbln1Q08879 705 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Ctdnep1Q3TP92 244 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Cdkl5Q3UTQ8 938 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Tpd52Q62393 224 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Nxf7Q80SZ6 620 aaKnown RBP28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Iffo2Q8R2V2 512 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Cmtm5Q9D6G9 156 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Zscan20B2KFW1 1030 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Syt1P46096 421 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Cnga2Q62398 664 aa28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 PfkpQ9WUA3 784 aaKnown RBP28.36■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Wfdc16A2A5H4 111 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Nolc1E9Q5C9 702 aaKnown RBP28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 EporP14753 507 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Hoxa11P31311 313 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Cyp2e1Q05421 493 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 MycbpapQ5SUV2 932 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Ranbp6Q8BIV3 1105 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Slc12a8Q8VI23 705 aa28.35■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 PfasQ5SUR0 1337 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Pfkfb3A7UAK5 555 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Ly6dP35459 127 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Nap1l2P51860 460 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Nploc4P60670 608 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Pou2f2Q00196 463 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Zfp957Q3UT76 567 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Znf618Q80YY7 953 aaKnown RBP28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Znf784Q8BI69 297 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Itgbl1Q8VDV0 494 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Map3k20Q9ESL4 802 aaKnown RBP28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Stk39Q9Z1W9 556 aa28.34■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Gm43951A0A0N4SUT6 962 aa28.33■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Kcna1P16388 495 aa28.33■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Liat1Q810M6 228 aa28.33■■■□□ 2.13
Cpsf4-201ENSMUST00000070487 Pabpc1lA2A5N3 607 aaKnown RBP28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Gm3138K7N754 218 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Parp1P11103 1013 aaKnown RBP28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Rps6P62754 249 aaKnown RBP28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Neurl1bQ0MW30 546 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Srrm1Q52KI8 946 aaKnown RBP28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Kiaa1211Q5PR69 1207 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 ShbQ6PD21 503 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Pgm5Q8BZF8 567 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Nlrp5Q9R1M5 1163 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 LtkP08923 888 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 NfiaQ02780 532 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Slitrk3Q810B9 980 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Kiaa1024Q8K3V7 917 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Plekha4Q8VC98 588 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Zcchc18Q8VD24 393 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Kdm4bQ91VY5 1086 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Prkag2Q91WG5 566 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 TbcbQ9D1E6 244 aa28.32■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Wdr19Q3UGF1 1341 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Sbf2E9PXF8 1872 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Ppfia3P60469 1194 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Snx17Q8BVL3 470 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 RadxQ8C779 850 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Rhobtb2Q91V93 728 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Znf687Q9D2D7 1237 aa28.31■■■□□ 2.12
Cpsf4-201ENSMUST00000070487 Nedd1P33215 660 aa28.3■■■□□ 2.12
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms