RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Tktl2Q9D4D4 627 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Git2Q9JLQ2 708 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Dnajc7Q9QYI3 494 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Myh4Q5SX39 1939 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 PfasQ5SUR0 1337 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Scgb2b11A0A087WR49 112 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Foxn3Q499D0 457 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Asic3Q6X1Y6 530 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pramel6Q810Y9 485 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fam193aQ8CGI1 1231 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Slc14a2Q8R4T9 930 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ipo7Q9EPL8 1038 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ccdc88aQ5SNZ0 1873 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Herc3A6H6S0 1050 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Trim30cD3YVI9 513 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Psmd14O35593 310 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Cct5P80316 541 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ssrp1Q08943 708 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ddb1Q3U1J4 1140 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ankrd13cQ3UX43 541 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fxr1Q61584 677 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gja3Q64448 417 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gimap8Q75N62 688 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 HlfQ8BW74 295 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 McamQ8R2Y2 648 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Uba5Q8VE47 403 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Dnajc17Q91WT4 303 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 CutaQ9CQ89 177 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 ToporslQ9D2F8 683 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 RabggtaQ9JHK4 567 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Peak1Q69Z38 1735 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fam186bD3Z420 943 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Nr1i2O54915 431 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tbc1d2bQ3U0J8 965 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 LrmpQ60664 539 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ezh2Q61188 746 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Mcm7Q61881 719 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ankrd23Q812A3 306 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Cabp7Q91ZM8 215 aa10.95□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Zfp781Q0P5U5 243 aa10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ica1lQ3TY65 431 aa10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ddx3yQ62095 658 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Etnk2A7MCT6 385 aa10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Sec31aQ3UPL0 1230 aaKnown RBP10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Krit1Q6S5J6 736 aa10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Mad2l2Q9D752 211 aa10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Clip2Q9Z0H8 1047 aa10.94□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Rc3h1Q4VGL6 1130 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Sema4bQ62179 823 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Adcy3Q8VHH7 1145 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Snrnp35Q9D384 244 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Dpf1Q9QX66 387 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Myh15E9Q264 1925 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tex13cD3YU32 604 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 NpcdF8VQB8 469 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Kifc2O08672 792 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Zfpm1O35615 995 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ifnar1P33896 590 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Kifap3P70188 793 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gm5592Q3V0A6 857 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Cep131Q62036 1060 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Rab11fip4Q8BQP8 635 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 SowahdQ8BY98 327 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 EpgnQ924X1 152 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Scn11aQ9R053 1765 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Snx12O70493 165 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Rps8P62242 208 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Atp1b3P97370 278 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ccna1Q61456 421 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Sycp1Q62209 993 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pde1cQ64338 706 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Trim9Q8C7M3 817 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ginm1Q91WR6 327 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Cd274Q9EP73 290 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 CenphQ9QYM8 241 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fut8Q9WTS2 575 aa10.93□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Zmym2Q9CU65 1376 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Man1a2P39098 641 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 NeblQ0II04 452 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Slc9a2Q3ZAS0 814 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ccdc42Q5SV66 316 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Srp68Q8BMA6 625 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Vmn1r218Q8R261 298 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Eps8l2Q99K30 729 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Hsd3b7Q9EQC1 369 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pkd2l2Q9JLG4 621 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 ThegQ9JMB1 375 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ppp2r3dQ9Z176 491 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gm7356A0A087WSA6 508 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gm30191A0A0U1RNT7 187 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ano3A2AHL1 981 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Prl2c2P04095 224 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Atp8b1Q148W0 1251 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tmem35bQ3U0Y2 150 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ccdc114Q3UX62 658 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Znf280dQ68FE8 974 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Spag7Q7TNE3 227 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ushbp1Q8R370 680 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Kank3Q9Z1P7 791 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tubb4bP68372 445 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms