RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Slc26a7Q8R2Z3 656 aa13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Gpr108Q91WD0 569 aa13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Rwdd2aQ9D9S3 292 aa13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cep152A2AUM9 1736 aaKnown RBP13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Depdc5P61460 1591 aa13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Sec24cG3X972 1096 aaKnown RBP13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 AsphQ8BSY0 741 aa13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Eef1gQ9D8N0 437 aaKnown RBP13.74□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Setbp1Q9Z180 1582 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Gm44503E9PYU5 387 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Vps41Q5KU39 853 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Epc1Q8C9X6 813 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Lmbrd1Q8K0B2 537 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 TnrQ8BYI9 1358 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Bfsp1A2AMT1 669 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ccdc152E9PX14 254 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ddit3P35639 168 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Rnf40Q3U319 1001 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ccdc92bQ5SUE3 299 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Nab2Q61127 525 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 C130026I21RikQ8C898 291 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Bzw2Q91VK1 419 aaKnown RBP13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Thap12Q9CUX1 758 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Sept3Q9Z1S5 350 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Aox4Q3TYQ9 1336 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Rsbn1lD3Z0K6 821 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Esr2O08537 530 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Adssl1P28650 457 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Birc2Q62210 612 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Atp2b4Q6Q477 1205 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ppil4Q9CXG3 492 aaKnown RBP13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 PdiltQ9DAN1 588 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Telo2Q9DC40 840 aaKnown RBP13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Adgrl3Q80TS3 1537 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Lrrc74aA0A1Y7VMD6 494 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Kansl3A2RSY1 903 aaKnown RBP13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ccdc24E9PUW8 296 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 P4hbP09103 509 aaKnown RBP13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Nr2f2P43135 414 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 GssP51855 474 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Tcp11Q01755 566 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Rnf207Q3V3A7 635 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Taok1Q5F2E8 1001 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Znf76Q8BMU0 568 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Appl2Q8K3G9 662 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Apopt1Q9CQW7 192 aa13.73□□□□□ -0.21
Sdf4-201ENSMUST00000050078 4932429P05RikA2ADI4 785 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ccdc78D3Z5T1 437 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cyp3a25O09158 503 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 XpcP51612 930 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Surf6P70279 355 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Pank4Q80YV4 820 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 GopcQ8BH60 463 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Kctd10Q922M3 315 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cst12Q9DAN8 128 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ehd4Q9EQP2 541 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Msh6P54276 1358 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ugt1a6bK9J7B2 531 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Idh1O88844 414 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Gucy2cQ3UWA6 1072 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cdc37Q61081 379 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ugt1a6Q64435 531 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ugt1a7cQ6ZQM8 531 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 KhnynQ80U38 671 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Otop3Q80UF9 577 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ankrd24Q80VM7 985 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Znf526Q8BI66 675 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Trpc3Q9QZC1 836 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Tcof1O08784 1320 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Krt24A1L317 512 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Pde1bQ01065 535 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Krt74Q6IFZ9 495 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Creb3l3Q91XE9 479 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Bag2Q91YN9 210 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Prpf3Q922U1 683 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Pstpip2Q99M15 334 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Large1Q9Z1M7 756 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Becn2P0DM65 447 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Eps15P42567 897 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Nsun2Q1HFZ0 757 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ctnna3Q65CL1 895 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Pcdhb14Q6PB90 796 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 PaoxQ8C0L6 504 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Tspyl4Q8VD63 406 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Eif4a3Q91VC3 411 aaKnown RBP13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Golga1Q9CW79 758 aa13.72□□□□□ -0.21
Sdf4-201ENSMUST00000050078 DnttP09838 530 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ankrd23Q812A3 306 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Sclt1G5E861 688 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Dnajb6O54946 365 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Ppp1r12cQ3UMT1 782 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 LrmpQ60664 539 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cep70Q6IQY5 616 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Susd4Q8BH32 490 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Mylk2Q8VCR8 613 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cdc42bpaQ3UU96 1719 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Cyp7b1Q60991 507 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Haus7Q8BKT8 364 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Rbm41Q8JZV4 413 aa13.71□□□□□ -0.21
Sdf4-201ENSMUST00000050078 Apol6B7ZC55 329 aa13.71□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms