RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ptgs1P22437 602 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Mcm3P25206 812 aaKnown RBP26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Madcam1Q61826 405 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Haus7Q8BKT8 364 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Trim11Q99PQ2 467 aa26.02■■□□□ 1.76
Upf3a-201ENSMUST00000043767 Kansl3A2RSY1 903 aaKnown RBP26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Arhgap4B1AUY3 965 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Usp17ldG5E8G2 545 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Usp17lcG5E8I7 545 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 C87499Q3UX49 493 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Tnni3kQ5GIG6 834 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Prl2c1Q5SVL9 228 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Tll1Q62381 1013 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Slc5a5Q99PN0 618 aa26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Snw1Q9CSN1 536 aaKnown RBP26.01■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Nme9A0A1L1SUL6 329 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Tph1P17532 447 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 PparaP23204 468 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Gpatch3Q8BIY1 525 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Azi2Q9QYP6 405 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 IkQ9Z1M8 557 aaKnown RBP26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Cnga2Q62398 664 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Znf653Q6YND2 615 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Ddx55Q6ZPL9 600 aaKnown RBP26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Arpp21Q9DCB4 807 aa26■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Api5O35841 504 aaKnown RBP25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 PtpraP18052 829 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Bri3bpQ8BXV2 253 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 MyripQ8K3I4 856 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Cyp26c1B2RXA7 518 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 EporP14753 507 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 LdhbP16125 334 aaKnown RBP25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Peg10Q7TN75 958 aaKnown RBP25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Gga3Q8BMI3 718 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Zhx2Q8C0C0 836 aaKnown RBP25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Kiaa1024Q8K3V7 917 aa25.99■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Gm7356A0A087WSA6 508 aa25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Gm43638A0A0J9YU36 694 aa25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Cfap58B2RW38 873 aa25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Plekha7Q3UIL6 1118 aaKnown RBP25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Ccdc84Q4VA36 332 aaKnown RBP25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 IqcgQ80W32 419 aa25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Morc2bQ8C5W4 1022 aa25.98■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Snx13Q6PHS6 957 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Tas2r124Q7M718 309 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Fbxo11Q7TPD1 930 aaKnown RBP25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Smc2Q8CG48 1191 aaKnown RBP25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Hnrnpul1Q8VDM6 859 aaKnown RBP25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Sapcd2Q9D818 391 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Cavin1O54724 392 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Abhd15Q5F2F2 459 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Cnksr2Q80YA9 1032 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Kctd10Q922M3 315 aa25.97■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Trappc10Q3TLI0 1259 aa25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Stxbp3Q60770 592 aa25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Sv2cQ69ZS6 727 aa25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Trpv1Q704Y3 839 aa25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Gprasp2Q8BUY8 826 aa25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Nop14Q8R3N1 860 aaKnown RBP25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Zcchc17Q9ESX4 241 aaKnown RBP25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Irx4Q9QY61 515 aa25.96■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Gm973E9Q295 1059 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Ankrd35E9Q9D8 996 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Dnajb6O54946 365 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 MsnP26041 577 aaKnown RBP25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Pfkfb1P70266 471 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Siah1bQ06985 282 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Ttll12Q3UDE2 639 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Brd2Q7JJ13 798 aaKnown RBP25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Angel2Q8K1C0 544 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Pspc1Q8R326 523 aaKnown RBP25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Cul5Q9D5V5 780 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Ifi202Q9R002 445 aa25.95■■□□□ 1.75
Upf3a-201ENSMUST00000043767 Tbc1d2B1AVH7 922 aa25.95■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Oog1E9Q5G7 496 aa25.95■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Tpd52l1O54818 204 aa25.95■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Tfcp2l1Q3UNW5 479 aa25.95■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Krt23Q99PS0 422 aa25.95■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Iqca1Q9CUL5 857 aa25.95■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Cdh15P33146 784 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 GabpaQ00422 454 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Slc10a4Q3UEZ8 437 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Usp49Q6P9L4 685 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Kcnf1Q7TSH7 493 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Hexim1Q8R409 356 aaKnown RBP25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Tesk2Q8VCT9 570 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 BaatQ91X34 420 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Vps16Q920Q4 839 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Ubiad1Q9DC60 336 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Tjp3Q9QXY1 905 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Col24a1Q30D77 1733 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Pls1Q3V0K9 630 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Adgre1Q61549 931 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Csrnp2Q8BGQ2 534 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Cep85Q8BMK0 761 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Pcdhb15Q91Y04 786 aa25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Pdcd6ipQ9WU78 869 aaKnown RBP25.94■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Gm10134F6ZQC6 126 aa25.93■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Arhgef16Q3U5C8 713 aa25.93■■□□□ 1.74
Upf3a-201ENSMUST00000043767 Rnf180Q3U827 592 aa25.93■■□□□ 1.74
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms