RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Kat6bQ8BRB7 1872 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Vmn2r71L7N2D8 855 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Folh1O35409 752 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ifnar1P33896 590 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Exoc8Q6PGF7 716 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Epha10Q8BYG9 1007 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Kif2bQ8C0N1 668 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Fbxo18Q8K2I9 1042 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Exoc1Q8R3S6 894 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tmem192Q9CXT7 266 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Prl2c5Q9JLV9 222 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 ThegQ9JMB1 375 aa16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Knop1Q9Z2Q2 478 aaKnown RBP16.77■□□□□ 0.27
Nup54-201ENSMUST00000038514 Slc39a2G3X943 309 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Nck2O55033 380 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Cep131Q62036 1060 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Sdad1Q80UZ2 687 aaKnown RBP16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 DlatQ8BMF4 642 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tldc1Q8K0P3 455 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Rbm19Q8R3C6 952 aaKnown RBP16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ginm1Q91WR6 327 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ribc1Q9D0B8 379 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Myh8P13542 1937 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ltn1Q6A009 1767 aa16.76■□□□□ 0.27
Nup54-201ENSMUST00000038514 Etnk2A7MCT6 385 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 RaraP11416 462 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Nap1l2P51860 460 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 NeblQ0II04 452 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Slc9a2Q3ZAS0 814 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Myo19Q5SV80 963 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Cdcp1Q5U462 833 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Antxr2Q6DFX2 487 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Kdm1aQ6ZQ88 853 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 LRWD1Q8BUI3 648 aaKnown RBP16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Sf3b3Q921M3 1217 aaKnown RBP16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ccdc83Q9D4V3 305 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Trp53inp1Q9QXE4 239 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Nr2e3Q9QXZ7 395 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Kifc2O08672 792 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Arhgap6O54834 987 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Pip4k2aO70172 405 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Usp53P15975 1069 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tmtc1Q3UV71 942 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Kctd3Q8BFX3 815 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Znf131Q8K3J5 619 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Arl6ip4Q9JM93 229 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Gja10Q9WUS4 505 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Lamb1P02469 1786 aa16.75■□□□□ 0.27
Nup54-201ENSMUST00000038514 Chrna9G3X8Z7 479 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ranbp1P34022 203 aaKnown RBP16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Slc12a2P55012 1205 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Maip1Q8BHE8 291 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Adcy3Q8VHH7 1145 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Trub2Q91WG3 331 aaKnown RBP16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ipo7Q9EPL8 1038 aaKnown RBP16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Npy5rO70342 466 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Prl2c3P04768 224 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Pla2g4aP47713 748 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Nol4P60954 483 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Scg2Q03517 617 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Lrsam1Q80ZI6 727 aa16.74■□□□□ 0.27
Nup54-201ENSMUST00000038514 Fam83bQ0VBM2 1012 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Eif3j1Q3UGC7 261 aaKnown RBP16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Aak1Q3UHJ0 959 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Lrrc55Q3UY51 311 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Eif3j2Q66JS6 263 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tekt3Q6X6Z7 490 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Cdk17Q8K0D0 523 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 McamQ8R2Y2 648 aaKnown RBP16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tor1aip1Q921T2 595 aaKnown RBP16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Efhd1Q9D4J1 240 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Mad2l2Q9D752 211 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Klra17Q9JMA4 273 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Letm1Q9Z2I0 738 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Stox1B2RQL2 990 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tmem132bF7BAB2 1078 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 CltaO08585 235 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Foxn3Q499D0 457 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Trim9Q8C7M3 817 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ccdc96Q9CR92 584 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Rpf2Q9JJ80 306 aaKnown RBP16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Git2Q9JLQ2 708 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 Sorbs3Q9R1Z8 733 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 JcadQ5DTX6 1320 aa16.73■□□□□ 0.27
Nup54-201ENSMUST00000038514 NpcdF8VQB8 469 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Gm42641I6L9G2 585 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Esyt2Q3TZZ7 845 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 PRAG1Q571I4 1179 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 D130040H23RikQ8BII3 405 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 AtripQ8BMG1 785 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Atp1a1Q8VDN2 1023 aaKnown RBP16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ndufv1Q91YT0 464 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Cabp7Q91ZM8 215 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 NsmfQ99NF2 532 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ppp1r3gQ9CW07 347 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Phrf1A6H619 1682 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Zfp781Q0P5U5 243 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Armc2Q3URY6 854 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ccna1Q61456 421 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Cd37Q61470 281 aa16.72■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms