RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Ildr1Q8CBR1 537 aa25.97■■□□□ 1.75
Cln6-201ENSMUST00000034776 Tmem79Q9D709 391 aa25.97■■□□□ 1.75
Cln6-201ENSMUST00000034776 Krt87Q6IMF0 495 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Abcf1Q6P542 837 aaKnown RBP25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Tor1aip2Q8BYU6 502 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Cabp7Q91ZM8 215 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Tab2Q99K90 693 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Alpk1Q9CXB8 1231 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Cul5Q9D5V5 780 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Ugt1a6bK9J7B2 531 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Eif5P59325 429 aaKnown RBP25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Ugt1a6Q64435 531 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Ugt1a7cQ6ZQM8 531 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Tmx1Q8VBT0 278 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Cd274Q9EP73 290 aa25.96■■□□□ 1.75
Cln6-201ENSMUST00000034776 Gmcl1Q920G9 524 aa25.95■■□□□ 1.74
Cln6-201ENSMUST00000034776 Hdac9Q99N13 588 aa25.95■■□□□ 1.74
Cln6-201ENSMUST00000034776 Arhgap4B1AUY3 965 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Nedd1P33215 660 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ift88Q61371 824 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ptger2Q62053 362 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ccdc122Q8BVN0 290 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Taf6lQ8R2K4 616 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Krt34Q9D646 392 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Nme9A0A1L1SUL6 329 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Cep135Q6P5D4 1140 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 Eid1Q9DCR4 169 aa25.94■■□□□ 1.74
Cln6-201ENSMUST00000034776 4932429P05RikA2ADI4 785 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Map7d1A2AJI0 846 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Msh3P13705 1091 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Rsbn1lD3Z0K6 821 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Sema3eP70275 775 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Kcnd1Q03719 651 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Cyp2e1Q05421 493 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Tshz1Q5DTH5 1084 aa25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Fxr2Q9WVR4 673 aaKnown RBP25.93■■□□□ 1.74
Cln6-201ENSMUST00000034776 Pcdh11xF6ZNL5 1338 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Tpm2P58774 284 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Kcnb1Q03717 857 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Vmn1r209Q5NC97 312 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 PrimpolQ6P1E7 537 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 BC048507Q80ZS7 89 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 MslnlQ8C160 685 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ccdc38Q8CDN8 563 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Eps8l1Q8R5F8 716 aa25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Rrp9Q91WM3 475 aaKnown RBP25.92■■□□□ 1.74
Cln6-201ENSMUST00000034776 Lrrc32G3XA59 663 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Fbln1Q08879 705 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Gse1Q3U3C9 1213 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Mns1Q61884 491 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ccdc189Q6NZQ0 333 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Trex1Q91XB0 314 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Pcdha12Q91Y18 950 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Cfap45Q9D9U9 551 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ulk4Q3V129 1303 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Prss51A0A286YDY8 319 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Klrk1O54709 232 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Cdkn1cP49919 348 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Psmd1Q3TXS7 953 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Tbx2Q60707 711 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Swap70Q6A028 585 aaKnown RBP25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Znrd1-asQ8R0E5 213 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Thap2Q9D305 217 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Mss51Q9D5Z5 446 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Uchl5Q9WUP7 329 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Dock2Q8C3J5 1828 aa25.91■■□□□ 1.74
Cln6-201ENSMUST00000034776 Apol7aB2RT54 418 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Krt18P05784 423 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Exoc8Q6PGF7 716 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Depdc1aQ8CIG0 804 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Krt82Q99M74 516 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Slc5a5Q99PN0 618 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Klf15Q9EPW2 415 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Prkab1Q9R078 270 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 EporP14753 507 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Gabpb2P81069 414 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 D630036H23RikQ3UQD6 204 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Lrrcc1Q69ZB0 1026 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Arhgef19Q8BWA8 802 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Mtmr6Q8VE11 617 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Oxnad1Q8VE38 311 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Ppp1r3gQ9CW07 347 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Sertad1Q9JL10 236 aa25.9■■□□□ 1.74
Cln6-201ENSMUST00000034776 Akr1c19G3X9Y6 323 aa25.89■■□□□ 1.74
Cln6-201ENSMUST00000034776 Adam6bQ6IMH7 756 aa25.89■■□□□ 1.74
Cln6-201ENSMUST00000034776 Taok2Q6ZQ29 1240 aa25.89■■□□□ 1.74
Cln6-201ENSMUST00000034776 Kiaa1024Q8K3V7 917 aa25.89■■□□□ 1.74
Cln6-201ENSMUST00000034776 Mfap3Q922T2 349 aa25.89■■□□□ 1.74
Cln6-201ENSMUST00000034776 Itga2bQ9QUM0 1033 aa25.89■■□□□ 1.74
Cln6-201ENSMUST00000034776 Znf568E9PYI1 671 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 CtshP49935 333 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Dnaaf5B9EJR8 853 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Tgfb2P27090 414 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 OatP29758 439 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Setdb2Q8C267 713 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Txndc5Q91W90 417 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Taf1dQ9D4V4 322 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Ccnt1Q9QWV9 724 aaKnown RBP25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Ifi202Q9R002 445 aa25.88■■□□□ 1.73
Cln6-201ENSMUST00000034776 Fam205a1D3YZF6 1314 aa25.88■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms