RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 VirmaA2AIV2 1811 aaKnown RBP14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Parp1P11103 1013 aaKnown RBP14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Nol4P60954 483 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 CtcfQ61164 736 aaKnown RBP14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Prpf40bQ80W14 870 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Trim9Q8C7M3 817 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ano2Q8CFW1 1002 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 GlyctkQ8QZY2 523 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Znf287Q9EQB9 759 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 AmfrQ9R049 643 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Sel1lQ9Z2G6 790 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Homer1Q9Z2Y3 366 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gm7356A0A087WSA6 508 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Wdhd1P59328 1117 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Txndc16Q7TN22 820 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Egfl6Q9JJZ5 550 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 PfasQ5SUR0 1337 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Glg1Q61543 1175 aaKnown RBP14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Madcam1Q61826 405 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Trmt2aQ8BNV1 574 aaKnown RBP14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tomm22Q9CPQ3 142 aa14.28□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Pitpnm2Q6ZPQ6 1335 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gm30191A0A0U1RNT7 187 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ddx23D3Z0M9 819 aaKnown RBP14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 SarsP26638 512 aaKnown RBP14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gdf10P97737 476 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 1810065E05RikQ5NC41 235 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Igbp1Q61249 340 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Pnpla2Q8BJ56 486 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tango6Q8C3S2 1079 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Spata32Q8C5V0 334 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ccdc12Q8R344 166 aaKnown RBP14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tor1aip1Q921T2 595 aaKnown RBP14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Inpp4aQ9EPW0 939 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Git2Q9JLQ2 708 aa14.27□□□□□ -0.12
Rnf4-201ENSMUST00000030992 IkbkbO88351 757 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Eef2P58252 858 aaKnown RBP14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Nell2Q61220 819 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Hspa4Q61316 841 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Clca4aQ6Q473 924 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dnph1Q80VJ3 173 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Phldb2Q8K1N2 1249 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Onecut3Q8K557 490 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 HyiQ8R1F5 277 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Uap1Q91YN5 522 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dnajc19Q9CQV7 116 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ambra1A2AH22 1300 aa14.27□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Cnbd1B1AWM0 430 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Gm5934D3Z4U6 212 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Actn3O88990 900 aaKnown RBP14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 PpardP35396 440 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Klhdc9Q3USL1 350 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ppfibp1Q8C8U0 969 aaKnown RBP14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Cdan1Q8CC12 1239 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 SltmQ8CH25 1031 aaKnown RBP14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Arhgef6Q8K4I3 771 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Gtf2iQ9ESZ8 998 aaKnown RBP14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dnajc7Q9QYI3 494 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dnm2P39054 870 aaKnown RBP14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Foxn3Q499D0 457 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Gtf3c5Q8R2T8 520 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Pkd2l2Q9JLG4 621 aa14.26□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Prdm11A2AGX3 565 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Bpifb4A2BGH0 617 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Krt18P05784 423 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Stim1P70302 685 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Krt86P97861 486 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Mindy1Q76LS9 468 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tesk2Q8VCT9 570 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Apopt1Q9CQW7 192 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Efhd1Q9D4J1 240 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 GsdmeQ9Z2D3 512 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Nrxn2E9Q7X7 1710 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Sec14l1A8Y5H7 715 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rexo5D3YW29 759 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Vcam1P29533 739 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Chp1P61022 195 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tmem35bQ3U0Y2 150 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Kdm1aQ6ZQ88 853 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Mxd3Q80US8 206 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Epn1Q80VP1 575 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Cracr2bQ80ZJ8 394 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Stap2Q8R0L1 411 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rab3il1Q8VDV3 383 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Kctd10Q922M3 315 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rhobtb3Q9CTN4 611 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Fam217aQ9D9W6 419 aa14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Fxr2Q9WVR4 673 aaKnown RBP14.25□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Pla2g4eQ50L42 875 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Glra4Q61603 456 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Fkbp3Q62446 224 aaKnown RBP14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Nyap1Q6PFX7 833 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Lrrn2Q6PHP6 730 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 KhnynQ80U38 671 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ccdc172Q810N9 267 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 AdpgkQ8VDL4 496 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Xrcc4Q924T3 326 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Krtap5-3Q9D226 196 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Syce1Q9D495 329 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Usp17lbE9Q9U0 468 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms