RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Supt3B0QZW4 406 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Irx1P81068 480 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Map3k7Q62073 579 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Impg2Q80XH2 1243 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Washc5Q8C2E7 1159 aaKnown RBP15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ttc27Q8CD92 847 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Itga6Q61739 1091 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ccdc87Q8CDL9 855 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Cog4Q8R1U1 785 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Kdm8Q9CXT6 414 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Xpo4Q9ESJ0 1151 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Cep104Q80V31 926 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Q80ZQ3 298 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 SybuQ8BHS8 665 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Tbx22Q8K402 517 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Zkscan16A2ALW2 728 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Catsper2A2ARP9 588 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Gm7995L7N2E4 160 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Sycp3P70281 254 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Crybg3Q80W49 1005 aa15.7■□□□□ 0.1
Col7a1-201ENSMUST00000026740 U2af2P26369 475 aaKnown RBP15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 SympkQ80X82 1284 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Tceanc2Q8R2M0 207 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Pcdhb12Q91Y07 789 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Pole3Q9JKP7 145 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Hyou1Q9JKR6 999 aaKnown RBP15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Myh6Q02566 1938 aaKnown RBP15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 PtprgQ05909 1442 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Duxf3A0A0N4SV92 674 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Rab3ipQ68EF0 428 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Caps2Q8BUG5 550 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 AticQ9CWJ9 592 aaKnown RBP15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 VmacQ8BP01 174 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Mettl5Q8K1A0 209 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Casp1P29452 402 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Snx1Q9WV80 522 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 IarsQ8BU30 1262 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ccdc169Q8BXX9 214 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Med7Q9CZB6 233 aa15.69■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Tmcc1Q69ZZ6 649 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Actn1Q7TPR4 892 aaKnown RBP15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Casp2P29594 452 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Itih1Q61702 907 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Syf2Q9D198 242 aaKnown RBP15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Gli2Q0VGT2 1544 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Abcc6Q9R1S7 1498 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Psma3O70435 255 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Myo1aO88329 1043 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Srek1ip1Q4V9W2 153 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ppp1r2Q9DCL8 206 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Med23Q80YQ2 1367 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Tfdp1Q08639 410 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ppp1r7Q3UM45 361 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ppp1r12aQ9DBR7 1029 aaKnown RBP15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Zfp597E9Q6S0 419 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 NeblQ0II04 452 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Znf667Q2TL60 609 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 4932411N23RikQ8C0S0 470 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Nfkbil1O88995 381 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Edem3Q2HXL6 931 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Map3k10Q66L42 940 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ptcd1Q8C2E4 695 aaKnown RBP15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 MrgbpQ9DAT2 204 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Serpinb6eI7HJI3 429 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Cul1Q9WTX6 776 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Psmd10Q9Z2X2 231 aa15.68■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Trim32Q8CH72 655 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Psip1Q99JF8 528 aaKnown RBP15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Frmpd1A2AKB4 1549 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Apol11bE9PUZ0 337 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Gm38392E9Q2A2 434 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ap1s3Q7TN05 154 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Cadps2Q8BYR5 1297 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Lrrc6O88978 473 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Snx19Q6P4T1 997 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Atp8b1Q148W0 1251 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Pram1Q6BCL1 675 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Slc25a24Q8BMD8 475 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Cd209bQ8CJ91 325 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Rassf9Q8K342 435 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ccdc88cQ6VGS5 2009 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Rasgrf1P27671 1262 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 1700109H08RikQ9D9C0 210 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 MefvQ9JJ26 767 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Plb1Q3TTY0 1478 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Daam2Q80U19 1115 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Usp8Q80U87 1080 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Cabp7Q91ZM8 215 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 St13Q99L47 371 aaKnown RBP15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Rad51ap2G3UW63 976 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 ThemisQ8BGW0 636 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Plcg2Q8CIH5 1265 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Eif3cQ8R1B4 911 aaKnown RBP15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Lrrc7Q80TE7 1490 aa15.67■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Ccdc78D3Z5T1 437 aa15.66■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Eya2O08575 532 aa15.66■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Sult6b1P0CC03 303 aa15.66■□□□□ 0.1
Col7a1-201ENSMUST00000026740 AmphQ7TQF7 686 aa15.66■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Fam133bQ9CVI2 245 aaKnown RBP15.66■□□□□ 0.1
Col7a1-201ENSMUST00000026740 Foxo3Q9WVH4 672 aa15.66■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms