RNA–Protein interactions for RNA: YPR172W

YPR172W, Transcript of Putative pyridoxal 5'-phosphate synthase, yeast

Gene YPR172W, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR172W	YPR172W	VPS4	P52917	437 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	MSS11	Q03825	758 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	TFC6	Q06339	672 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	NUS1	Q12063	375 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	ATG9	Q12142	997 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	INP53	Q12271	1107 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	NKP1	Q12493	238 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	PCD1	Q12524	340 aa		3.24	□□□□□ -1.89
YPR172W	YPR172W	CBS2	P14905	389 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	TYR1	P20049	452 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	SPE2	P21182	396 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	MCM4	P30665	933 aa	Known RBP	3.23	□□□□□ -1.89
YPR172W	YPR172W	SNU114	P36048	1008 aa	Known RBP	3.23	□□□□□ -1.89
YPR172W	YPR172W	ARP1	P38696	384 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	UBA4	P38820	440 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	YER130C	P39959	443 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	YDL186W	P48568	277 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	YGL082W	P53155	381 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	TDA7	P53882	636 aa	Predicted RBP	3.23	□□□□□ -1.89
YPR172W	YPR172W	UBX4	P54730	416 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	RPM2	Q02773	1202 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	ADE13	Q05911	482 aa	Known RBP	3.23	□□□□□ -1.89
YPR172W	YPR172W	RDR1	Q08904	546 aa		3.23	□□□□□ -1.89
YPR172W	YPR172W	LCB1	P25045	558 aa	Known RBP	3.22	□□□□□ -1.89
YPR172W	YPR172W	CMK1	P27466	446 aa	Known RBP	3.22	□□□□□ -1.89
YPR172W	YPR172W	SNC1	P31109	117 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	ACH1	P32316	526 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	LOS1	P33418	1100 aa	Predicted RBP	3.22	□□□□□ -1.89
YPR172W	YPR172W	AVT5	P38176	459 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	IFA38	P38286	347 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	DIA4	P38705	446 aa	Predicted RBP	3.22	□□□□□ -1.89
YPR172W	YPR172W	ZDS2	P54786	942 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	REG1	Q00816	1014 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	YOR019W	Q99248	730 aa		3.22	□□□□□ -1.89
YPR172W	YPR172W	YBR085C-A	O43137	85 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	ERG8	P24521	451 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	PGS1	P25578	521 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	TEF4	P36008	412 aa	Known RBP	3.21	□□□□□ -1.9
YPR172W	YPR172W	YNK1	P36010	153 aa	Known RBP	3.21	□□□□□ -1.9
YPR172W	YPR172W	YBP1	P38315	674 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	SMK1	P41808	388 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	IME4	P41833	600 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	YJL132W	P47014	750 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	IKS1	P47042	667 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	YNR061C	P53747	219 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	FMP45	Q07651	309 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	PSK2	Q08217	1101 aa		3.21	□□□□□ -1.9
YPR172W	YPR172W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
YPR172W	YPR172W	RIC1	P40395	1056 aa		3.2	□□□□□ -1.9
YPR172W	YPR172W	AXL1	P40851	1208 aa		3.2	□□□□□ -1.9
YPR172W	YPR172W	BOR1	P53838	576 aa		3.2	□□□□□ -1.9
YPR172W	YPR172W	INA17	Q02888	182 aa		3.2	□□□□□ -1.9
YPR172W	YPR172W	ERP1	Q05359	219 aa	Known RBP	3.2	□□□□□ -1.9
YPR172W	YPR172W	SSK1	Q07084	712 aa		3.2	□□□□□ -1.9
YPR172W	YPR172W	YOL159C	Q08300	171 aa		3.2	□□□□□ -1.9
YPR172W	YPR172W	YLR302C	O13544	120 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	RPL15A	P05748	204 aa	Known RBP	3.19	□□□□□ -1.9
YPR172W	YPR172W	VPS17	P32913	551 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	YNG2	P38806	282 aa	Known RBP	3.19	□□□□□ -1.9
YPR172W	YPR172W	UME6	P39001	836 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	SEC24	P40482	926 aa	Known RBP	3.19	□□□□□ -1.9
YPR172W	YPR172W	YJL213W	P40896	331 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	SGM1	P47166	707 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	MUB1	Q03162	620 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	RBA50	Q04418	439 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	RCO1	Q04779	684 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	CDC45	Q08032	650 aa		3.19	□□□□□ -1.9
YPR172W	YPR172W	ARG81	P05085	880 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	PUT2	P07275	575 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	RPB2	P08518	1224 aa	Known RBP	3.18	□□□□□ -1.9
YPR172W	YPR172W	SNF3	P10870	884 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	REV1	P12689	985 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	MTF1	P14908	341 aa	Known RBP	3.18	□□□□□ -1.9
YPR172W	YPR172W	SAN1	P22470	610 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	CNS1	P33313	385 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	LAG1	P38703	411 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	PSD1	P39006	500 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	RPH1	P39956	796 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	MKT1	P40850	830 aa	Known RBP	3.18	□□□□□ -1.9
YPR172W	YPR172W	YPI1	P43587	155 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	RTT101	P47050	842 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	COS10	P52924	374 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	STR3	P53101	465 aa	Known RBP	3.18	□□□□□ -1.9
YPR172W	YPR172W	YMR160W	Q03823	816 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	THI20	Q08224	551 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	ETT1	Q08421	412 aa	Known RBP	3.18	□□□□□ -1.9
YPR172W	YPR172W	YLL056C	Q12177	298 aa		3.18	□□□□□ -1.9
YPR172W	YPR172W	GDH1	P07262	454 aa	Known RBP	3.17	□□□□□ -1.9
YPR172W	YPR172W	APA1	P16550	321 aa	Known RBP	3.17	□□□□□ -1.9
YPR172W	YPR172W	PDB1	P32473	366 aa	Known RBP	3.17	□□□□□ -1.9
YPR172W	YPR172W	ECM15	P35195	104 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	TSC10	P38342	320 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	DBP8	P38719	431 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	PYK2	P52489	506 aa	Known RBP	3.17	□□□□□ -1.9
YPR172W	YPR172W	YGL242C	P53066	181 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	SHE10	P53075	577 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	SAM50	P53969	484 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	EMI2	Q04409	500 aa	Known RBP	3.17	□□□□□ -1.9
YPR172W	YPR172W	SKG3	Q06315	1026 aa		3.17	□□□□□ -1.9
YPR172W	YPR172W	SET6	Q12529	373 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms