RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	RRP3	P38712	501 aa	Known RBP	2.79	□□□□□ -1.96
MSS18	YPR134W	YIL161W	P40449	235 aa	Known RBP	2.79	□□□□□ -1.96
MSS18	YPR134W	RTS2	P40962	232 aa		2.79	□□□□□ -1.96
MSS18	YPR134W	TAN1	P53072	289 aa	Predicted RBP	2.79	□□□□□ -1.96
MSS18	YPR134W	SMA1	Q02651	245 aa		2.79	□□□□□ -1.96
MSS18	YPR134W	TAP42	Q04372	366 aa		2.79	□□□□□ -1.96
MSS18	YPR134W	DAP1	Q12091	152 aa		2.79	□□□□□ -1.96
MSS18	YPR134W	RSF2	P46974	1380 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	ADE3	P07245	946 aa	Known RBP	2.78	□□□□□ -1.96
MSS18	YPR134W	YML003W	P0CF16	290 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	PDA1	P16387	420 aa	Known RBP	2.78	□□□□□ -1.96
MSS18	YPR134W	RPB8	P20436	146 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	TKL1	P23254	680 aa	Known RBP	2.78	□□□□□ -1.96
MSS18	YPR134W	GID7	P25569	745 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	BUD14	P27637	709 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	AAP1	P37898	856 aa	Known RBP	2.78	□□□□□ -1.96
MSS18	YPR134W	APM3	P38153	483 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	RGI2	P40188	164 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	DIM1	P41819	318 aa	Known RBP	2.78	□□□□□ -1.96
MSS18	YPR134W	RPN11	P43588	306 aa	Known RBP	2.78	□□□□□ -1.96
MSS18	YPR134W	CTK2	P46962	323 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	ZAP1	P47043	880 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	SGF73	P53165	657 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	TAM41	P53230	385 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	BSC1	Q12140	328 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	YOL114C	Q12322	202 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	ENT1	Q12518	454 aa		2.78	□□□□□ -1.96
MSS18	YPR134W	MHP1	P43638	1398 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	PIF1	P07271	859 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	YSP3	P25036	478 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	ARP2	P32381	391 aa	Known RBP	2.77	□□□□□ -1.97
MSS18	YPR134W	UBP13	P38187	747 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	FOL1	P53848	824 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	EKI1	Q03764	534 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	CSR1	Q06705	408 aa	Known RBP	2.77	□□□□□ -1.97
MSS18	YPR134W	SLM3	Q12093	417 aa		2.77	□□□□□ -1.97
MSS18	YPR134W	CBS2	P14905	389 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	SRP54	P20424	541 aa	Known RBP	2.76	□□□□□ -1.97
MSS18	YPR134W	CLB2	P24869	491 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	YKL133C	P36066	463 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	YBP1	P38315	674 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	RFC1	P38630	861 aa	Known RBP	2.76	□□□□□ -1.97
MSS18	YPR134W	DED81	P38707	554 aa	Known RBP	2.76	□□□□□ -1.97
MSS18	YPR134W	MDM31	P38880	579 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	SEC31	P38968	1273 aa	Known RBP	2.76	□□□□□ -1.97
MSS18	YPR134W	CPR6	P53691	371 aa	Known RBP	2.76	□□□□□ -1.97
MSS18	YPR134W	TY4B-H	P0C2J7	1802 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	TY4B-J	P47024	1803 aa		2.76	□□□□□ -1.97
MSS18	YPR134W	GLN3	P18494	730 aa		2.75	□□□□□ -1.97
MSS18	YPR134W	VPS27	P40343	622 aa	Known RBP	2.75	□□□□□ -1.97
MSS18	YPR134W	YJL068C	P40363	299 aa		2.75	□□□□□ -1.97
MSS18	YPR134W	MDG1	P53885	366 aa		2.75	□□□□□ -1.97
MSS18	YPR134W	CRN1	Q06440	651 aa		2.75	□□□□□ -1.97
MSS18	YPR134W	CSR2	Q12734	1121 aa		2.75	□□□□□ -1.97
MSS18	YPR134W	SIR4	P11978	1358 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	FKS3	Q04952	1785 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	SNF2	P22082	1703 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	APC1	P53886	1748 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	CHO1	P08456	276 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	PET111	P08468	800 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	SSB1	P11484	613 aa	Known RBP	2.74	□□□□□ -1.97
MSS18	YPR134W	REV1	P12689	985 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	MRPL36	P36531	177 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	ERG7	P38604	731 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	SSB2	P40150	613 aa	Known RBP	2.74	□□□□□ -1.97
MSS18	YPR134W	MKT1	P40850	830 aa	Known RBP	2.74	□□□□□ -1.97
MSS18	YPR134W	AZF1	P41696	914 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	TRS130	Q03660	1102 aa		2.74	□□□□□ -1.97
MSS18	YPR134W	URB1	P34241	1764 aa	Known RBP	2.74	□□□□□ -1.97
MSS18	YPR134W	RPO41	P13433	1351 aa	Known RBP	2.74	□□□□□ -1.97
MSS18	YPR134W	SWI4	P25302	1093 aa	Known RBP	2.73	□□□□□ -1.97
MSS18	YPR134W	CDC15	P27636	974 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	GAC1	P28006	793 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	TFC3	P34111	1160 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	NTR2	P36118	322 aa	Predicted RBP	2.73	□□□□□ -1.97
MSS18	YPR134W	YHR218W	P38899	603 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	RPT2	P40327	437 aa	Known RBP	2.73	□□□□□ -1.97
MSS18	YPR134W	HXT9	P40885	567 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	ERR3	P42222	437 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	ASE1	P50275	885 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	SHE10	P53075	577 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	IST1	P53843	298 aa	Predicted RBP	2.73	□□□□□ -1.97
MSS18	YPR134W	VAM6	Q07468	1049 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	YDL218W	Q07629	317 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	YEH2	Q07950	538 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	TLG2	Q08144	397 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	YML133C	Q03099	1374 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	YLL067C	Q07888	1374 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	YLL066C	Q99208	1374 aa		2.73	□□□□□ -1.97
MSS18	YPR134W	ATP2	P00830	511 aa	Known RBP	2.72	□□□□□ -1.97
MSS18	YPR134W	NCP1	P16603	691 aa	Known RBP	2.72	□□□□□ -1.97
MSS18	YPR134W	EXO84	P38261	753 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	RTS1	P38903	757 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	KRE9	P39005	276 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	ECM10	P39987	644 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	FET5	P43561	622 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	YJL132W	P47014	750 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	YGL242C	P53066	181 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	YGL082W	P53155	381 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	RSM28	Q03430	361 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms