RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C PPH21P23594 369 aa2.17□□□□□ -2.06
ATG11YPR049C RFA2P26754 273 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C PMI40P29952 429 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C KHA1P40309 873 aa2.17□□□□□ -2.06
ATG11YPR049C RTA1P53047 317 aa2.17□□□□□ -2.06
ATG11YPR049C MND1P53102 219 aa2.17□□□□□ -2.06
ATG11YPR049C SPC105P53148 917 aa2.17□□□□□ -2.06
ATG11YPR049C RTC4P53850 401 aa2.17□□□□□ -2.06
ATG11YPR049C SSL2Q00578 843 aa2.17□□□□□ -2.06
ATG11YPR049C PGI1P12709 554 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C GFA1P14742 717 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C GRR1P24814 1151 aa2.17□□□□□ -2.06
ATG11YPR049C SNT1P25357 1226 aa2.17□□□□□ -2.06
ATG11YPR049C KAR9P32526 644 aa2.17□□□□□ -2.06
ATG11YPR049C RPP1P38786 293 aa2.17□□□□□ -2.06
ATG11YPR049C UFE1P41834 346 aa2.17□□□□□ -2.06
ATG11YPR049C PHO23P50947 330 aa2.17□□□□□ -2.06
ATG11YPR049C MUB1Q03162 620 aa2.17□□□□□ -2.06
ATG11YPR049C NOP12Q08208 459 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C MCH5Q08777 521 aa2.17□□□□□ -2.06
ATG11YPR049C FRE5Q08908 694 aa2.17□□□□□ -2.06
ATG11YPR049C ALG7P07286 448 aa2.17□□□□□ -2.06
ATG11YPR049C CDC20P26309 610 aa2.17□□□□□ -2.06
ATG11YPR049C NOP4P37838 685 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C MUM2P38236 366 aa2.17□□□□□ -2.06
ATG11YPR049C YEN1P40028 759 aa2.17□□□□□ -2.06
ATG11YPR049C SEC24P40482 926 aaKnown RBP2.17□□□□□ -2.06
ATG11YPR049C SER33P40510 469 aa2.17□□□□□ -2.06
ATG11YPR049C SSU1P41930 458 aa2.17□□□□□ -2.06
ATG11YPR049C EXG2P52911 562 aa2.17□□□□□ -2.06
ATG11YPR049C RNT1Q02555 471 aa2.17□□□□□ -2.06
ATG11YPR049C RPC11Q04307 110 aaPredicted RBP2.17□□□□□ -2.06
ATG11YPR049C CDA1Q06702 301 aa2.17□□□□□ -2.06
ATG11YPR049C PSK2Q08217 1101 aa2.17□□□□□ -2.06
ATG11YPR049C SOD2P00447 233 aa2.16□□□□□ -2.06
ATG11YPR049C CAR2P07991 424 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C YBR062CP38239 180 aa2.16□□□□□ -2.06
ATG11YPR049C AXL2P38928 823 aa2.16□□□□□ -2.06
ATG11YPR049C ARG2P40360 574 aa2.16□□□□□ -2.06
ATG11YPR049C ASK10P48361 1146 aa2.16□□□□□ -2.06
ATG11YPR049C ALG12P53730 551 aa2.16□□□□□ -2.06
ATG11YPR049C YPK1P12688 680 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C AEP2P22136 580 aa2.16□□□□□ -2.06
ATG11YPR049C ERG4P25340 473 aa2.16□□□□□ -2.06
ATG11YPR049C SIN4P32259 974 aa2.16□□□□□ -2.06
ATG11YPR049C YKR078WP36158 585 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C BAP2P38084 609 aa2.16□□□□□ -2.06
ATG11YPR049C EFM2P38347 419 aa2.16□□□□□ -2.06
ATG11YPR049C DHH1P39517 506 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C PPN1Q04119 674 aa2.16□□□□□ -2.06
ATG11YPR049C ERV41Q04651 352 aa2.16□□□□□ -2.06
ATG11YPR049C DIC1Q06143 298 aa2.16□□□□□ -2.06
ATG11YPR049C NTG2Q08214 380 aa2.16□□□□□ -2.06
ATG11YPR049C MDM35O60200 86 aa2.16□□□□□ -2.06
ATG11YPR049C PUT4P15380 627 aa2.16□□□□□ -2.06
ATG11YPR049C FUR1P18562 216 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C MRPL8P22353 238 aa2.16□□□□□ -2.06
ATG11YPR049C GDA1P32621 518 aa2.16□□□□□ -2.06
ATG11YPR049C ORC2P32833 620 aa2.16□□□□□ -2.06
ATG11YPR049C PRS1P32895 427 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C LRO1P40345 661 aa2.16□□□□□ -2.06
ATG11YPR049C YGR237CP50089 785 aa2.16□□□□□ -2.06
ATG11YPR049C STR3P53101 465 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C YTP1P53584 459 aa2.16□□□□□ -2.06
ATG11YPR049C YNL040WP53960 456 aaPredicted RBP2.16□□□□□ -2.06
ATG11YPR049C EGD1Q02642 157 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C PLB2Q03674 706 aa2.16□□□□□ -2.06
ATG11YPR049C VBA4Q04602 768 aaKnown RBP2.16□□□□□ -2.06
ATG11YPR049C RAX1Q08760 435 aa2.16□□□□□ -2.06
ATG11YPR049C YPL272CQ08984 517 aa2.16□□□□□ -2.06
ATG11YPR049C BIK1P11709 440 aa2.15□□□□□ -2.06
ATG11YPR049C FRS2P15625 503 aaKnown RBP2.15□□□□□ -2.06
ATG11YPR049C NUP1P20676 1076 aa2.15□□□□□ -2.06
ATG11YPR049C CDC13P32797 924 aaKnown RBP2.15□□□□□ -2.06
ATG11YPR049C DUT1P33317 147 aa2.15□□□□□ -2.06
ATG11YPR049C TRZ1P36159 838 aaPredicted RBP2.15□□□□□ -2.06
ATG11YPR049C ARA1P38115 344 aa2.15□□□□□ -2.06
ATG11YPR049C TSL1P38427 1098 aaKnown RBP2.15□□□□□ -2.06
ATG11YPR049C PMT3P47190 753 aa2.15□□□□□ -2.06
ATG11YPR049C YGR053CP53234 283 aa2.15□□□□□ -2.06
ATG11YPR049C API2Q04413 109 aa2.15□□□□□ -2.06
ATG11YPR049C TRE2Q08693 809 aa2.15□□□□□ -2.06
ATG11YPR049C MED1Q12321 566 aa2.15□□□□□ -2.06
ATG11YPR049C CDC9P04819 755 aa2.15□□□□□ -2.07
ATG11YPR049C MNE1P24720 663 aa2.15□□□□□ -2.07
ATG11YPR049C CWP1P28319 239 aa2.15□□□□□ -2.07
ATG11YPR049C CTS1P29029 562 aa2.15□□□□□ -2.07
ATG11YPR049C TFC3P34111 1160 aa2.15□□□□□ -2.07
ATG11YPR049C PHO11P35842 467 aa2.15□□□□□ -2.07
ATG11YPR049C PXL1P36166 706 aa2.15□□□□□ -2.07
ATG11YPR049C PHO12P38693 467 aa2.15□□□□□ -2.07
ATG11YPR049C ELO3P40319 345 aa2.15□□□□□ -2.07
ATG11YPR049C YJL043WP47053 257 aa2.15□□□□□ -2.07
ATG11YPR049C YKE2P52553 114 aa2.15□□□□□ -2.07
ATG11YPR049C PEX31P53203 462 aa2.15□□□□□ -2.07
ATG11YPR049C SNP1Q00916 300 aaPredicted RBP2.15□□□□□ -2.07
ATG11YPR049C CWC21Q03375 135 aaKnown RBP2.15□□□□□ -2.07
ATG11YPR049C CRT10Q08226 957 aa2.15□□□□□ -2.07
ATG11YPR049C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
ATG11YPR049C YKL023WP36103 277 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms