RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	YLL056C	Q12177	298 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	GSC2	P40989	1895 aa		0.85	□□□□□ -2.27
BEM3	YPL115C	SOD1	P00445	154 aa	Known RBP	0.84	□□□□□ -2.27
BEM3	YPL115C	POL4	P25615	582 aa		0.84	□□□□□ -2.27
BEM3	YPL115C	SYN8	P31377	255 aa		0.84	□□□□□ -2.27
BEM3	YPL115C	HXT1	P32465	570 aa		0.84	□□□□□ -2.27
BEM3	YPL115C	TEF4	P36008	412 aa	Known RBP	0.84	□□□□□ -2.27
BEM3	YPL115C	UBX6	P47049	396 aa		0.84	□□□□□ -2.27
BEM3	YPL115C	VMS1	Q04311	632 aa	Known RBP	0.84	□□□□□ -2.27
BEM3	YPL115C	YER078W-A	Q3E7A2	54 aa		0.84	□□□□□ -2.27
BEM3	YPL115C	HEM2	P05373	342 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	YML002W	P0CF17	737 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	YIM1	P28625	365 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	MUD2	P36084	527 aa	Known RBP	0.84	□□□□□ -2.28
BEM3	YPL115C	AAP1	P37898	856 aa	Known RBP	0.84	□□□□□ -2.28
BEM3	YPL115C	UBA4	P38820	440 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	BZZ1	P38822	633 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	BUR6	P40096	142 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	VPS25	P47142	202 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	TMA64	Q04600	565 aa	Known RBP	0.84	□□□□□ -2.28
BEM3	YPL115C	RSF1	Q05043	376 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	SWA2	Q06677	668 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	EDE1	P34216	1381 aa		0.84	□□□□□ -2.28
BEM3	YPL115C	GID7	P25569	745 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	CPR3	P25719	182 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	NTR2	P36118	322 aa	Predicted RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	ECM10	P39987	644 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	COG1	P53079	417 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	RPC11	Q04307	110 aa	Predicted RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	YLR281C	Q05863	155 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	ECI1	Q05871	280 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	RVB2	Q12464	471 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	RPO21	P04050	1733 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	SGS1	P35187	1447 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	RPN2	P32565	945 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	SPR1	P32603	445 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	MAL33	P38157	468 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	IFA38	P38286	347 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	YHL041W	P38730	149 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	YPI1	P43587	155 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	SUB1	P54000	292 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	MSC1	Q03104	513 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	MLC2	Q06580	163 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	VIP1	Q06685	1146 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	YOR019W	Q99248	730 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	VCX1	Q99385	411 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	ATP2	P00830	511 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	MIS1	P09440	975 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	EST1	P17214	699 aa	Predicted RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	SRV2	P17555	526 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	MCK1	P21965	375 aa	Known RBP	0.83	□□□□□ -2.28
BEM3	YPL115C	PFA5	Q03289	374 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	BNA5	Q05979	453 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	TMA16	Q08687	178 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	YDL012C	Q12489	107 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	CSR2	Q12734	1121 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	HIR3	P47171	1648 aa		0.83	□□□□□ -2.28
BEM3	YPL115C	PET122	P10355	254 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	MRC1	P25588	1096 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	MIA40	P36046	403 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	MRPL36	P36531	177 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	STV1	P37296	890 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	PSY4	P38193	441 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	NDE1	P40215	560 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	PRE5	P40302	234 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	DJP1	P40564	432 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	TIS11	P47977	285 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	YNL181W	P53878	407 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	ARK1	P53974	638 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	CTL1	Q03220	320 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	RSM28	Q03430	361 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	TSA2	Q04120	196 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	ATG23	Q06671	453 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	THI20	Q08224	551 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	HUA2	Q12134	243 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	AYT1	Q12226	474 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	PDA1	P16387	420 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	CHS3	P29465	1165 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	SAC1	P32368	623 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	ERG1	P32476	496 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	PTH2	P34222	208 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	SAD1	P43589	448 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	UBP8	P50102	471 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	MTG1	Q03151	367 aa	Predicted RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	YDR415C	Q04033	374 aa	Predicted RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	ERP1	Q05359	219 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	UTP21	Q06078	939 aa	Predicted RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	ATG26	Q06321	1198 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	ENT4	Q07872	247 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	TMS1	Q12116	473 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	PDH1	Q12428	516 aa	Known RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	SKM1	Q12469	655 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	IML1	P47170	1584 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	AAC3	P18238	307 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	ISY1	P21374	235 aa	Predicted RBP	0.82	□□□□□ -2.28
BEM3	YPL115C	MSS51	P32335	436 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	SWH1	P35845	1188 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	MRPL4	P36517	319 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	ERG7	P38604	731 aa		0.82	□□□□□ -2.28
BEM3	YPL115C	MTC6	P38849	526 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms