RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W OCA4P25366 362 aa2.21□□□□□ -2.06
SEC16YPL085W ARE1P25628 610 aa2.21□□□□□ -2.06
SEC16YPL085W YCR090CP25654 182 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W YCR099CP25657 155 aa2.21□□□□□ -2.06
SEC16YPL085W CYM1P32898 989 aa2.21□□□□□ -2.06
SEC16YPL085W SPO23P33757 523 aa2.21□□□□□ -2.06
SEC16YPL085W TIP20P33891 701 aa2.21□□□□□ -2.06
SEC16YPL085W AIM18P38884 321 aa2.21□□□□□ -2.06
SEC16YPL085W PIK1P39104 1066 aa2.21□□□□□ -2.06
SEC16YPL085W FHL1P39521 936 aa2.21□□□□□ -2.06
SEC16YPL085W LAS21P40367 830 aa2.21□□□□□ -2.06
SEC16YPL085W GUF1P46943 645 aa2.21□□□□□ -2.06
SEC16YPL085W TY4A-JP47023 414 aa2.21□□□□□ -2.06
SEC16YPL085W RPS12P48589 143 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W TAN1P53072 289 aaPredicted RBP2.21□□□□□ -2.06
SEC16YPL085W CUS2P53830 285 aaPredicted RBP2.21□□□□□ -2.06
SEC16YPL085W CDC123Q05791 360 aa2.21□□□□□ -2.06
SEC16YPL085W BCP1Q06338 283 aa2.21□□□□□ -2.06
SEC16YPL085W SNX3Q08826 162 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W GPM2Q12008 311 aa2.21□□□□□ -2.06
SEC16YPL085W RAD59Q12223 238 aa2.21□□□□□ -2.06
SEC16YPL085W NTO1Q12311 748 aa2.21□□□□□ -2.06
SEC16YPL085W YOR032W-AQ8TGS1 66 aa2.21□□□□□ -2.06
SEC16YPL085W MED11Q99278 115 aa2.21□□□□□ -2.06
SEC16YPL085W TPK2P06245 380 aa2.21□□□□□ -2.06
SEC16YPL085W CPA1P07258 411 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W NPR1P22211 790 aa2.21□□□□□ -2.06
SEC16YPL085W SPB1P25582 841 aaPredicted RBP2.21□□□□□ -2.06
SEC16YPL085W VBA3P25594 458 aa2.21□□□□□ -2.06
SEC16YPL085W STP22P25604 385 aa2.21□□□□□ -2.06
SEC16YPL085W VMA6P32366 345 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W HOG1P32485 435 aa2.21□□□□□ -2.06
SEC16YPL085W SHP1P34223 423 aa2.21□□□□□ -2.06
SEC16YPL085W UIP5P36137 443 aa2.21□□□□□ -2.06
SEC16YPL085W VBA5P36172 582 aa2.21□□□□□ -2.06
SEC16YPL085W BIT2P38346 545 aa2.21□□□□□ -2.06
SEC16YPL085W MLH1P38920 769 aa2.21□□□□□ -2.06
SEC16YPL085W FET3P38993 636 aa2.21□□□□□ -2.06
SEC16YPL085W ALR2P43553 858 aa2.21□□□□□ -2.06
SEC16YPL085W TIM54P47045 478 aa2.21□□□□□ -2.06
SEC16YPL085W ASK10P48361 1146 aa2.21□□□□□ -2.06
SEC16YPL085W YKR005CQ02203 525 aa2.21□□□□□ -2.06
SEC16YPL085W ARP10Q04549 284 aa2.21□□□□□ -2.06
SEC16YPL085W YPQ2Q06328 317 aa2.21□□□□□ -2.06
SEC16YPL085W YDL057WQ07379 328 aa2.21□□□□□ -2.06
SEC16YPL085W TRE2Q08693 809 aa2.21□□□□□ -2.06
SEC16YPL085W PGC1Q08959 321 aa2.21□□□□□ -2.06
SEC16YPL085W YOL159C-AQ3E769 90 aa2.21□□□□□ -2.06
SEC16YPL085W YPT6Q99260 215 aa2.21□□□□□ -2.06
SEC16YPL085W RPL6BP05739 176 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W ISY1P21374 235 aaPredicted RBP2.21□□□□□ -2.06
SEC16YPL085W TRX2P22803 104 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W YUR1P26725 428 aa2.21□□□□□ -2.06
SEC16YPL085W RRN3P36070 627 aa2.21□□□□□ -2.06
SEC16YPL085W YHR182WP38870 785 aa2.21□□□□□ -2.06
SEC16YPL085W UTP9P38882 575 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W STL1P39932 569 aa2.21□□□□□ -2.06
SEC16YPL085W OSW5P40219 148 aa2.21□□□□□ -2.06
SEC16YPL085W AGP3P43548 558 aa2.21□□□□□ -2.06
SEC16YPL085W YMR1P47147 688 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SEC16YPL085W SSN8P47821 323 aa2.21□□□□□ -2.06
SEC16YPL085W DRN1P53255 507 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W MNT4P53745 580 aa2.21□□□□□ -2.06
SEC16YPL085W HXT15P54854 567 aa2.21□□□□□ -2.06
SEC16YPL085W PRP38Q00723 242 aaPredicted RBP2.21□□□□□ -2.06
SEC16YPL085W YLR446WQ06204 433 aa2.21□□□□□ -2.06
SEC16YPL085W YOL087CQ99247 1116 aa2.21□□□□□ -2.06
SEC16YPL085W Q0010Q9ZZX9 128 aa2.21□□□□□ -2.06
SEC16YPL085W THP2O13539 261 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W ASP3-2P0CX77 362 aa2.2□□□□□ -2.06
SEC16YPL085W ASP3-3P0CX78 362 aa2.2□□□□□ -2.06
SEC16YPL085W ASP3-4P0CX79 362 aa2.2□□□□□ -2.06
SEC16YPL085W ASP3-1P0CZ17 362 aa2.2□□□□□ -2.06
SEC16YPL085W SLM5P25345 492 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W RPS7AP26786 190 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W IXR1P33417 597 aa2.2□□□□□ -2.06
SEC16YPL085W TAF14P35189 244 aa2.2□□□□□ -2.06
SEC16YPL085W CAB2P40506 365 aa2.2□□□□□ -2.06
SEC16YPL085W SKP2P42843 763 aa2.2□□□□□ -2.06
SEC16YPL085W COS4P43542 379 aa2.2□□□□□ -2.06
SEC16YPL085W PUS2P53167 370 aa2.2□□□□□ -2.06
SEC16YPL085W HPF1Q05164 967 aa2.2□□□□□ -2.06
SEC16YPL085W YLL007CQ07799 665 aa2.2□□□□□ -2.06
SEC16YPL085W RGT2Q12300 763 aa2.2□□□□□ -2.06
SEC16YPL085W AI5_BETAQ9ZZX0 354 aa2.2□□□□□ -2.06
SEC16YPL085W FIG2P25653 1609 aa2.2□□□□□ -2.06
SEC16YPL085W ADE4P04046 510 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W EXO70P19658 623 aa2.2□□□□□ -2.06
SEC16YPL085W PRP28P23394 588 aa2.2□□□□□ -2.06
SEC16YPL085W CTR86P25355 563 aa2.2□□□□□ -2.06
SEC16YPL085W ECM25P32525 599 aa2.2□□□□□ -2.06
SEC16YPL085W UTR4P32626 227 aa2.2□□□□□ -2.06
SEC16YPL085W GLG1P36143 616 aa2.2□□□□□ -2.06
SEC16YPL085W YER137CP40083 148 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W MAD2P40958 196 aa2.2□□□□□ -2.06
SEC16YPL085W UFE1P41834 346 aa2.2□□□□□ -2.06
SEC16YPL085W YNL010WP53981 241 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W TVP15Q03860 143 aa2.2□□□□□ -2.06
SEC16YPL085W BSC2Q05611 235 aa2.2□□□□□ -2.06
SEC16YPL085W YTM1Q12024 460 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms