RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	SEF1	P34228	1148 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	GCS1	P35197	352 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	STB6	P36085	766 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	TCD2	P36101	447 aa	Known RBP	3.9	□□□□□ -1.79
CAF20	YOR276W	DIA4	P38705	446 aa	Predicted RBP	3.9	□□□□□ -1.79
CAF20	YOR276W	LRP1	P38801	184 aa	Known RBP	3.9	□□□□□ -1.79
CAF20	YOR276W	EXO1	P39875	702 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	PHM8	P40025	321 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	SSU1	P41930	458 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	IMD4	P50094	524 aa	Known RBP	3.9	□□□□□ -1.79
CAF20	YOR276W	YPR003C	P53394	754 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	DPB4	Q04603	196 aa	Known RBP	3.9	□□□□□ -1.79
CAF20	YOR276W	AIM32	Q04689	311 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	MRD1	Q06106	887 aa	Known RBP	3.9	□□□□□ -1.79
CAF20	YOR276W	RAD34	Q06665	692 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	YOR389W	Q08912	624 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	ATG9	Q12142	997 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	RLM1	Q12224	676 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	INP53	Q12271	1107 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	ICT1	Q12385	394 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	AVL9	Q12500	764 aa		3.9	□□□□□ -1.79
CAF20	YOR276W	HEM1	P09950	548 aa	Predicted RBP	3.89	□□□□□ -1.79
CAF20	YOR276W	MRP13	P12686	339 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	SAT4	P25333	603 aa	Known RBP	3.89	□□□□□ -1.79
CAF20	YOR276W	ADH7	P25377	361 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	TIF3	P34167	436 aa	Known RBP	3.89	□□□□□ -1.79
CAF20	YOR276W	APE4	P38821	490 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	ALG5	P40350	334 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	YJL043W	P47053	257 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	ERB1	Q04660	807 aa	Known RBP	3.89	□□□□□ -1.79
CAF20	YOR276W	ECM22	Q05958	814 aa	Predicted RBP	3.89	□□□□□ -1.79
CAF20	YOR276W	ATG29	Q12092	213 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	YML133C	Q03099	1374 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	YLL067C	Q07888	1374 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	YLL066C	Q99208	1374 aa		3.89	□□□□□ -1.79
CAF20	YOR276W	HSP82	P02829	709 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	ILS1	P09436	1072 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	AQY1	P0CD91	305 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	PMS1	P14242	873 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	PDA1	P16387	420 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	YMC1	P32331	307 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	SSE2	P32590	693 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	UGP1	P32861	499 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	WBP1	P33767	430 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	PMT1	P33775	817 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	YBR144C	P34215	104 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	ELO1	P39540	310 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	UIP3	P39547	235 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	PAC2	P39937	518 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	PKP1	P40530	394 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	HOS2	P53096	452 aa	Predicted RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	ART5	P53244	586 aa	Known RBP	3.88	□□□□□ -1.79
CAF20	YOR276W	NNF2	P53253	936 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	EFM6	P53970	246 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	THI3	Q07471	609 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	ULA1	Q12059	462 aa		3.88	□□□□□ -1.79
CAF20	YOR276W	YMR084W	A2P2R3	262 aa		3.87	□□□□□ -1.79
CAF20	YOR276W	IMG1	P25626	169 aa		3.87	□□□□□ -1.79
CAF20	YOR276W	SYN8	P31377	255 aa		3.87	□□□□□ -1.79
CAF20	YOR276W	SNU114	P36048	1008 aa	Known RBP	3.87	□□□□□ -1.79
CAF20	YOR276W	CMC1	P36064	111 aa		3.87	□□□□□ -1.79
CAF20	YOR276W	OTU2	P38747	307 aa	Known RBP	3.87	□□□□□ -1.79
CAF20	YOR276W	BNI5	P53890	448 aa	Known RBP	3.87	□□□□□ -1.79
CAF20	YOR276W	PFA5	Q03289	374 aa		3.87	□□□□□ -1.79
CAF20	YOR276W	ARX1	Q03862	593 aa	Known RBP	3.87	□□□□□ -1.79
CAF20	YOR276W	BI2	P03873	423 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	CHO1	P08456	276 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	NAT1	P12945	854 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	RPL3	P14126	387 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	APE1	P14904	514 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	SPE2	P21182	396 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	CLB1	P24868	471 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	PUP3	P25451	205 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	DPH2	P32461	534 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	VPH1	P32563	840 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	TMT1	P32643	299 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	RPC34	P32910	317 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	APE3	P37302	537 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	ERV46	P39727	415 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	JEM1	P40358	645 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	ZIM17	P42844	174 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	RPN11	P43588	306 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	PTR3	P43606	678 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	FAR3	P46671	204 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	SAE2	P46946	345 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	MRK1	P50873	501 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	TWF1	P53250	332 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	OGG1	P53397	376 aa	Predicted RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	BOP3	P53958	396 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	RQC1	Q05468	723 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	RTT109	Q07794	436 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	TEN1	Q07921	160 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	YAP7	Q08182	245 aa		3.86	□□□□□ -1.79
CAF20	YOR276W	LEU9	Q12166	604 aa	Known RBP	3.86	□□□□□ -1.79
CAF20	YOR276W	YER145C-A	A0A023PYF4	145 aa		3.85	□□□□□ -1.79
CAF20	YOR276W	ADE5,7	P07244	802 aa	Known RBP	3.85	□□□□□ -1.79
CAF20	YOR276W	MRP2	P10663	115 aa	Predicted RBP	3.85	□□□□□ -1.79
CAF20	YOR276W	RAP1	P11938	827 aa		3.85	□□□□□ -1.79
CAF20	YOR276W	REC107	P21651	314 aa		3.85	□□□□□ -1.79
CAF20	YOR276W	APN1	P22936	367 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms