RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeast

Gene VAM3, Length 852 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM3	YOR106W	RIM2	P38127	377 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	ERG7	P38604	731 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	PHO90	P39535	881 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	UIP3	P39547	235 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	IES5	P40060	125 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	KAP123	P40069	1113 aa	Known RBP	4.68	□□□□□ -1.66
VAM3	YOR106W	SKG3	Q06315	1026 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	YOL159C	Q08300	171 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	RDR1	Q08904	546 aa		4.68	□□□□□ -1.66
VAM3	YOR106W	RRP3	P38712	501 aa	Known RBP	4.67	□□□□□ -1.66
VAM3	YOR106W	YER010C	P40011	234 aa		4.67	□□□□□ -1.66
VAM3	YOR106W	NUP100	Q02629	959 aa		4.67	□□□□□ -1.66
VAM3	YOR106W	YML002W	P0CF17	737 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	PMS1	P14242	873 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	GLN3	P18494	730 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	SNU114	P36048	1008 aa	Known RBP	4.66	□□□□□ -1.66
VAM3	YOR106W	ALY1	P36117	915 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	DIA4	P38705	446 aa	Predicted RBP	4.66	□□□□□ -1.66
VAM3	YOR106W	BUR6	P40096	142 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	SLZ1	P40167	298 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	PKP2	P53170	491 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	RTT103	Q05543	409 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	YMR230W-A	Q3E7B5	62 aa		4.66	□□□□□ -1.66
VAM3	YOR106W	MCM4	P30665	933 aa	Known RBP	4.65	□□□□□ -1.67
VAM3	YOR106W	STR3	P53101	465 aa	Known RBP	4.65	□□□□□ -1.67
VAM3	YOR106W	ADE13	Q05911	482 aa	Known RBP	4.65	□□□□□ -1.67
VAM3	YOR106W	PGS1	P25578	521 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	PRO3	P32263	286 aa	Known RBP	4.64	□□□□□ -1.67
VAM3	YOR106W	ANS1	P38832	159 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	YJL068C	P40363	299 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	SOL4	P53315	255 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	ZDS2	P54786	942 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	INA17	Q02888	182 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	EMI2	Q04409	500 aa	Known RBP	4.64	□□□□□ -1.67
VAM3	YOR106W	SNO4	Q04902	237 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	PSR1	Q07800	427 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	HSP33	Q08914	237 aa	Known RBP	4.64	□□□□□ -1.67
VAM3	YOR106W	HSP32	Q08992	237 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	DAP1	Q12091	152 aa		4.64	□□□□□ -1.67
VAM3	YOR106W	ERG1	P32476	496 aa	Known RBP	4.63	□□□□□ -1.67
VAM3	YOR106W	PHD1	P36093	366 aa		4.63	□□□□□ -1.67
VAM3	YOR106W	VPS24	P36095	224 aa	Known RBP	4.63	□□□□□ -1.67
VAM3	YOR106W	DBP8	P38719	431 aa		4.63	□□□□□ -1.67
VAM3	YOR106W	RPS7B	P48164	190 aa	Known RBP	4.63	□□□□□ -1.67
VAM3	YOR106W	PIL1	P53252	339 aa	Known RBP	4.63	□□□□□ -1.67
VAM3	YOR106W	TMA64	Q04600	565 aa	Known RBP	4.63	□□□□□ -1.67
VAM3	YOR106W	SCW10	Q04951	389 aa		4.63	□□□□□ -1.67
VAM3	YOR106W	NKP1	Q12493	238 aa		4.63	□□□□□ -1.67
VAM3	YOR106W	ARG81	P05085	880 aa		4.62	□□□□□ -1.67
VAM3	YOR106W	SNF3	P10870	884 aa		4.62	□□□□□ -1.67
VAM3	YOR106W	PDA1	P16387	420 aa	Known RBP	4.62	□□□□□ -1.67
VAM3	YOR106W	PWP2	P25635	923 aa	Known RBP	4.62	□□□□□ -1.67
VAM3	YOR106W	PDB1	P32473	366 aa	Known RBP	4.62	□□□□□ -1.67
VAM3	YOR106W	YNG2	P38806	282 aa	Known RBP	4.62	□□□□□ -1.67
VAM3	YOR106W	AXL2	P38928	823 aa		4.62	□□□□□ -1.67
VAM3	YOR106W	DIM1	P41819	318 aa	Known RBP	4.62	□□□□□ -1.67
VAM3	YOR106W	AAD10	P47182	288 aa		4.62	□□□□□ -1.67
VAM3	YOR106W	DIA3	P52290	468 aa		4.62	□□□□□ -1.67
VAM3	YOR106W	VMA16	P23968	213 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	ARP1	P38696	384 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	UBA4	P38820	440 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	INN1	P53901	409 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	SSK1	Q07084	712 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	ARP6	Q12509	438 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	YOL087C	Q99247	1116 aa		4.61	□□□□□ -1.67
VAM3	YOR106W	CBF2	P32504	956 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	SPC34	P36131	295 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	ROT2	P38138	954 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	TSC10	P38342	320 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	FMP10	P40098	244 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	YJR061W	P40355	935 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	AXL1	P40851	1208 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	GUF1	P46943	645 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	SGM1	P47166	707 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	YGL082W	P53155	381 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
VAM3	YOR106W	TDA7	P53882	636 aa	Predicted RBP	4.6	□□□□□ -1.67
VAM3	YOR106W	MSS11	Q03825	758 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	FMP45	Q07651	309 aa		4.6	□□□□□ -1.67
VAM3	YOR106W	PRE8	P23639	250 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	SNC1	P31109	117 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	RRN3	P36070	627 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	DHH1	P39517	506 aa	Known RBP	4.59	□□□□□ -1.67
VAM3	YOR106W	ELO1	P39540	310 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	CBK1	P53894	756 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	ECM30	Q06673	1274 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	YEH2	Q07950	538 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	TCO89	Q08921	799 aa		4.59	□□□□□ -1.67
VAM3	YOR106W	LEU9	Q12166	604 aa	Known RBP	4.59	□□□□□ -1.67
VAM3	YOR106W	PUT2	P07275	575 aa		4.58	□□□□□ -1.68
VAM3	YOR106W	TYR1	P20049	452 aa		4.58	□□□□□ -1.68
VAM3	YOR106W	PWP1	P21304	576 aa	Known RBP	4.58	□□□□□ -1.68
VAM3	YOR106W	ADH7	P25377	361 aa		4.58	□□□□□ -1.68
VAM3	YOR106W	CMK1	P27466	446 aa	Known RBP	4.58	□□□□□ -1.68
VAM3	YOR106W	ACH1	P32316	526 aa		4.58	□□□□□ -1.68
VAM3	YOR106W	YNK1	P36010	153 aa	Known RBP	4.58	□□□□□ -1.68
VAM3	YOR106W	AGP2	P38090	596 aa		4.58	□□□□□ -1.68
VAM3	YOR106W	ERG26	P53199	349 aa	Known RBP	4.58	□□□□□ -1.68
VAM3	YOR106W	YMR160W	Q03823	816 aa		4.58	□□□□□ -1.68
VAM3	YOR106W	RIX7	Q07844	837 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms