RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W ALG5P40350 334 aa3.81□□□□□ -1.8
TRM112YNR046W YJL107CP42947 387 aa3.81□□□□□ -1.8
TRM112YNR046W DPB4Q04603 196 aaKnown RBP3.81□□□□□ -1.8
TRM112YNR046W OSW1Q08692 278 aa3.81□□□□□ -1.8
TRM112YNR046W BUD7Q08754 746 aa3.81□□□□□ -1.8
TRM112YNR046W RIM20Q12033 661 aa3.81□□□□□ -1.8
TRM112YNR046W YLR111WQ12528 110 aa3.81□□□□□ -1.8
TRM112YNR046W BNR1P40450 1375 aa3.8□□□□□ -1.8
TRM112YNR046W CHO1P08456 276 aa3.8□□□□□ -1.8
TRM112YNR046W EST1P17214 699 aaPredicted RBP3.8□□□□□ -1.8
TRM112YNR046W BOS1P25385 244 aa3.8□□□□□ -1.8
TRM112YNR046W NFU1P32860 256 aa3.8□□□□□ -1.8
TRM112YNR046W BYE1P36106 594 aa3.8□□□□□ -1.8
TRM112YNR046W MNN2P38069 597 aa3.8□□□□□ -1.8
TRM112YNR046W VID24P38263 362 aa3.8□□□□□ -1.8
TRM112YNR046W TSC10P38342 320 aa3.8□□□□□ -1.8
TRM112YNR046W YEL057CP39983 233 aa3.8□□□□□ -1.8
TRM112YNR046W MET18P40469 1032 aa3.8□□□□□ -1.8
TRM112YNR046W DOT5P40553 215 aa3.8□□□□□ -1.8
TRM112YNR046W ERG26P53199 349 aaKnown RBP3.8□□□□□ -1.8
TRM112YNR046W BOP3P53958 396 aa3.8□□□□□ -1.8
TRM112YNR046W YDR239CQ03780 787 aa3.8□□□□□ -1.8
TRM112YNR046W EMI2Q04409 500 aaKnown RBP3.8□□□□□ -1.8
TRM112YNR046W SWF1Q04629 336 aa3.8□□□□□ -1.8
TRM112YNR046W PIG1Q06216 648 aa3.8□□□□□ -1.8
TRM112YNR046W GET3Q12154 354 aaKnown RBP3.8□□□□□ -1.8
TRM112YNR046W RTN2Q12443 393 aa3.8□□□□□ -1.8
TRM112YNR046W GAL80P04387 435 aa3.79□□□□□ -1.8
TRM112YNR046W GPA1P08539 472 aa3.79□□□□□ -1.8
TRM112YNR046W ERG11P10614 530 aa3.79□□□□□ -1.8
TRM112YNR046W PDA1P16387 420 aaKnown RBP3.79□□□□□ -1.8
TRM112YNR046W APN1P22936 367 aa3.79□□□□□ -1.8
TRM112YNR046W STE50P25344 346 aa3.79□□□□□ -1.8
TRM112YNR046W PUP3P25451 205 aaKnown RBP3.79□□□□□ -1.8
TRM112YNR046W IMG1P25626 169 aa3.79□□□□□ -1.8
TRM112YNR046W ERG3P32353 365 aa3.79□□□□□ -1.8
TRM112YNR046W TCD2P36101 447 aaKnown RBP3.79□□□□□ -1.8
TRM112YNR046W DBP8P38719 431 aa3.79□□□□□ -1.8
TRM112YNR046W GPD2P41911 440 aaKnown RBP3.79□□□□□ -1.8
TRM112YNR046W SNO3P43544 222 aa3.79□□□□□ -1.8
TRM112YNR046W NMD5P46970 1048 aa3.79□□□□□ -1.8
TRM112YNR046W JJJ1P53863 590 aa3.79□□□□□ -1.8
TRM112YNR046W YMR155WQ03795 547 aa3.79□□□□□ -1.8
TRM112YNR046W FIN1Q03898 291 aa3.79□□□□□ -1.8
TRM112YNR046W CDC45Q08032 650 aa3.79□□□□□ -1.8
TRM112YNR046W GRX6Q12438 231 aa3.79□□□□□ -1.8
TRM112YNR046W YER145C-AA0A023PYF4 145 aa3.78□□□□□ -1.8
TRM112YNR046W ARG81P05085 880 aa3.78□□□□□ -1.8
TRM112YNR046W ART10P18634 518 aaKnown RBP3.78□□□□□ -1.8
TRM112YNR046W DBF4P32325 704 aa3.78□□□□□ -1.8
TRM112YNR046W MRE11P32829 692 aa3.78□□□□□ -1.8
TRM112YNR046W PXA2P34230 853 aa3.78□□□□□ -1.8
TRM112YNR046W PXL1P36166 706 aa3.78□□□□□ -1.8
TRM112YNR046W FLO10P36170 1169 aa3.78□□□□□ -1.8
TRM112YNR046W CST26P38226 397 aa3.78□□□□□ -1.8
TRM112YNR046W OTU2P38747 307 aaKnown RBP3.78□□□□□ -1.8
TRM112YNR046W SMF1P38925 575 aa3.78□□□□□ -1.8
TRM112YNR046W SGN1P40561 250 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
TRM112YNR046W AXL1P40851 1208 aa3.78□□□□□ -1.8
TRM112YNR046W MAF1P41910 395 aa3.78□□□□□ -1.8
TRM112YNR046W TWF1P53250 332 aa3.78□□□□□ -1.8
TRM112YNR046W IPI3P53877 555 aa3.78□□□□□ -1.8
TRM112YNR046W IDP3P53982 420 aaKnown RBP3.78□□□□□ -1.8
TRM112YNR046W TEN1Q07921 160 aa3.78□□□□□ -1.8
TRM112YNR046W ATG29Q12092 213 aa3.78□□□□□ -1.8
TRM112YNR046W PGK1P00560 416 aaKnown RBP3.77□□□□□ -1.81
TRM112YNR046W PDX1P16451 410 aa3.77□□□□□ -1.81
TRM112YNR046W NUP1P20676 1076 aa3.77□□□□□ -1.81
TRM112YNR046W KGD1P20967 1014 aaKnown RBP3.77□□□□□ -1.81
TRM112YNR046W CLB2P24869 491 aa3.77□□□□□ -1.81
TRM112YNR046W CLB3P24870 427 aa3.77□□□□□ -1.81
TRM112YNR046W COQ3P27680 312 aa3.77□□□□□ -1.81
TRM112YNR046W GPI10P30777 616 aa3.77□□□□□ -1.81
TRM112YNR046W YBL055CP34220 418 aaPredicted RBP3.77□□□□□ -1.81
TRM112YNR046W MIA40P36046 403 aa3.77□□□□□ -1.81
TRM112YNR046W CMC1P36064 111 aa3.77□□□□□ -1.81
TRM112YNR046W APT1P49435 187 aaKnown RBP3.77□□□□□ -1.81
TRM112YNR046W IMD4P50094 524 aaKnown RBP3.77□□□□□ -1.81
TRM112YNR046W ERG13P54839 491 aaKnown RBP3.77□□□□□ -1.81
TRM112YNR046W ECM30Q06673 1274 aa3.77□□□□□ -1.81
TRM112YNR046W GRC3Q07845 632 aa3.77□□□□□ -1.81
TRM112YNR046W FRE3Q08905 711 aa3.77□□□□□ -1.81
TRM112YNR046W PGA3Q12746 312 aaKnown RBP3.77□□□□□ -1.81
TRM112YNR046W SGS1P35187 1447 aa3.77□□□□□ -1.81
TRM112YNR046W MRP13P12686 339 aa3.76□□□□□ -1.81
TRM112YNR046W CNA1P23287 553 aa3.76□□□□□ -1.81
TRM112YNR046W BUD5P25300 642 aaPredicted RBP3.76□□□□□ -1.81
TRM112YNR046W GAC1P28006 793 aa3.76□□□□□ -1.81
TRM112YNR046W WBP1P33767 430 aaKnown RBP3.76□□□□□ -1.81
TRM112YNR046W TIF3P34167 436 aaKnown RBP3.76□□□□□ -1.81
TRM112YNR046W YKL100CP34248 587 aa3.76□□□□□ -1.81
TRM112YNR046W NUP133P36161 1157 aa3.76□□□□□ -1.81
TRM112YNR046W CIN4P39110 191 aa3.76□□□□□ -1.81
TRM112YNR046W LSM5P40089 93 aaKnown RBP3.76□□□□□ -1.81
TRM112YNR046W PET130P47065 347 aa3.76□□□□□ -1.81
TRM112YNR046W YTP1P53584 459 aa3.76□□□□□ -1.81
TRM112YNR046W EAF7P53911 425 aaKnown RBP3.76□□□□□ -1.81
TRM112YNR046W ASI1P54074 624 aa3.76□□□□□ -1.81
TRM112YNR046W ARP10Q04549 284 aa3.76□□□□□ -1.81
TRM112YNR046W NDJ1Q12366 352 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms