RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W ENA2Q01896 1091 aa2.77□□□□□ -1.97
CAF120YNL278W MMT1Q03218 510 aa2.77□□□□□ -1.97
CAF120YNL278W YLR177WQ06251 628 aa2.77□□□□□ -1.97
CAF120YNL278W SFI1Q12369 946 aa2.77□□□□□ -1.97
CAF120YNL278W ENA5Q12691 1091 aa2.77□□□□□ -1.97
CAF120YNL278W LSO2Q3E772 92 aaKnown RBP2.77□□□□□ -1.97
CAF120YNL278W CBP2P03874 630 aaPredicted RBP2.76□□□□□ -1.97
CAF120YNL278W RPS31P05759 152 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W MSS116P15424 664 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W THR1P17423 357 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W URA4P20051 364 aa2.76□□□□□ -1.97
CAF120YNL278W AEP2P22136 580 aa2.76□□□□□ -1.97
CAF120YNL278W ILV6P25605 309 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W HMX1P32339 317 aa2.76□□□□□ -1.97
CAF120YNL278W RGT1P32862 1170 aa2.76□□□□□ -1.97
CAF120YNL278W SRL3P36167 246 aa2.76□□□□□ -1.97
CAF120YNL278W VHC1P38329 1120 aa2.76□□□□□ -1.97
CAF120YNL278W DYS1P38791 387 aa2.76□□□□□ -1.97
CAF120YNL278W YPT35P38815 214 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W UTP9P38882 575 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W AIM18P38884 321 aa2.76□□□□□ -1.97
CAF120YNL278W CKB2P38930 258 aa2.76□□□□□ -1.97
CAF120YNL278W LYS9P38999 446 aa2.76□□□□□ -1.97
CAF120YNL278W FHL1P39521 936 aa2.76□□□□□ -1.97
CAF120YNL278W STL1P39932 569 aa2.76□□□□□ -1.97
CAF120YNL278W SAP1P39955 897 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W ATG3P40344 310 aa2.76□□□□□ -1.97
CAF120YNL278W VHR1P40522 640 aa2.76□□□□□ -1.97
CAF120YNL278W LIA1P47120 325 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W INP52P50942 1183 aa2.76□□□□□ -1.97
CAF120YNL278W ARO8P53090 500 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W RBG2P53295 368 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W UFO1Q04511 668 aa2.76□□□□□ -1.97
CAF120YNL278W LCB5Q06147 687 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W OMS1Q06668 471 aa2.76□□□□□ -1.97
CAF120YNL278W YDL114WQ07530 308 aa2.76□□□□□ -1.97
CAF120YNL278W ERP3Q12403 225 aa2.76□□□□□ -1.97
CAF120YNL278W EFG1Q3E705 233 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W JIP3O13555 125 aa2.76□□□□□ -1.97
CAF120YNL278W PAB1P04147 577 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
CAF120YNL278W YER152CP10356 443 aa2.76□□□□□ -1.97
CAF120YNL278W SPO12P17123 173 aa2.76□□□□□ -1.97
CAF120YNL278W PRP9P19736 530 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W PRP2P20095 876 aaPredicted RBP2.76□□□□□ -1.97
CAF120YNL278W DBP2P24783 546 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W AEP1P32493 518 aa2.76□□□□□ -1.97
CAF120YNL278W UBC6P33296 250 aaPredicted RBP2.76□□□□□ -1.97
CAF120YNL278W MDL1P33310 695 aa2.76□□□□□ -1.97
CAF120YNL278W MDJ1P35191 511 aa2.76□□□□□ -1.97
CAF120YNL278W MTH1P35198 433 aa2.76□□□□□ -1.97
CAF120YNL278W SPT23P35210 1082 aa2.76□□□□□ -1.97
CAF120YNL278W HEK2P38199 381 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97 RIP-Chip
CAF120YNL278W COS111P38308 924 aa2.76□□□□□ -1.97
CAF120YNL278W TSC10P38342 320 aa2.76□□□□□ -1.97
CAF120YNL278W SMF2P38778 549 aa2.76□□□□□ -1.97
CAF120YNL278W ALP1P38971 573 aa2.76□□□□□ -1.97
CAF120YNL278W GZF3P42944 551 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W YFL034WP43564 1073 aa2.76□□□□□ -1.97
CAF120YNL278W ALT1P52893 592 aa2.76□□□□□ -1.97
CAF120YNL278W STR3P53101 465 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W MON1P53129 644 aa2.76□□□□□ -1.97
CAF120YNL278W RIM8P53179 542 aa2.76□□□□□ -1.97
CAF120YNL278W RPN14P53196 417 aa2.76□□□□□ -1.97
CAF120YNL278W SIW14P53965 281 aa2.76□□□□□ -1.97
CAF120YNL278W PEX25Q02969 394 aa2.76□□□□□ -1.97
CAF120YNL278W YDL124WQ07551 312 aaKnown RBP2.76□□□□□ -1.97
CAF120YNL278W MDY2Q12285 212 aa2.76□□□□□ -1.97
CAF120YNL278W YKL068W-AQ3E826 78 aa2.76□□□□□ -1.97
CAF120YNL278W RAD18P10862 487 aa2.75□□□□□ -1.97
CAF120YNL278W APE1P14904 514 aa2.75□□□□□ -1.97
CAF120YNL278W GUK1P15454 187 aaKnown RBP2.75□□□□□ -1.97
CAF120YNL278W HPR1P17629 752 aaKnown RBP2.75□□□□□ -1.97
CAF120YNL278W HOP1P20050 605 aa2.75□□□□□ -1.97
CAF120YNL278W MNE1P24720 663 aa2.75□□□□□ -1.97
CAF120YNL278W RRP43P25359 394 aaPredicted RBP2.75□□□□□ -1.97
CAF120YNL278W RRP7P25368 297 aaPredicted RBP2.75□□□□□ -1.97
CAF120YNL278W KAR4P25583 335 aa2.75□□□□□ -1.97
CAF120YNL278W SEC65P29478 273 aa2.75□□□□□ -1.97
CAF120YNL278W TFC1P32367 649 aa2.75□□□□□ -1.97
CAF120YNL278W KAP104P38217 918 aaKnown RBP2.75□□□□□ -1.97
CAF120YNL278W FAT1P38225 669 aa2.75□□□□□ -1.97
CAF120YNL278W PHO88P38264 188 aaPredicted RBP2.75□□□□□ -1.97
CAF120YNL278W ARN1P38731 627 aa2.75□□□□□ -1.97
CAF120YNL278W GCN20P43535 752 aaKnown RBP2.75□□□□□ -1.97
CAF120YNL278W AGP3P43548 558 aa2.75□□□□□ -1.97
CAF120YNL278W AIM14P53109 570 aa2.75□□□□□ -1.97
CAF120YNL278W YNR068CP53754 272 aa2.75□□□□□ -1.97
CAF120YNL278W YNL040WP53960 456 aaPredicted RBP2.75□□□□□ -1.97
CAF120YNL278W ARK1P53974 638 aa2.75□□□□□ -1.97
CAF120YNL278W LGE1Q02796 332 aaKnown RBP2.75□□□□□ -1.97
CAF120YNL278W ABZ2Q03266 374 aa2.75□□□□□ -1.97
CAF120YNL278W VHS1Q03785 461 aa2.75□□□□□ -1.97
CAF120YNL278W HLR1Q04429 423 aa2.75□□□□□ -1.97
CAF120YNL278W BUD20Q08004 166 aaPredicted RBP2.75□□□□□ -1.97
CAF120YNL278W SMC5Q08204 1093 aa2.75□□□□□ -1.97
CAF120YNL278W VIK1Q12045 647 aa2.75□□□□□ -1.97
CAF120YNL278W PAR32Q12515 295 aaKnown RBP2.75□□□□□ -1.97
CAF120YNL278W PDX1P16451 410 aa2.75□□□□□ -1.97
CAF120YNL278W YPK2P18961 677 aa2.75□□□□□ -1.97
CAF120YNL278W DBP3P20447 523 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms