RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C INP53Q12271 1107 aa3.44□□□□□ -1.86
VPS9YML097C PET111P08468 800 aa3.43□□□□□ -1.86
VPS9YML097C APN1P22936 367 aa3.43□□□□□ -1.86
VPS9YML097C STE50P25344 346 aa3.43□□□□□ -1.86
VPS9YML097C IMG1P25626 169 aa3.43□□□□□ -1.86
VPS9YML097C ERV1P27882 189 aa3.43□□□□□ -1.86
VPS9YML097C CMC1P36064 111 aa3.43□□□□□ -1.86
VPS9YML097C DIA4P38705 446 aaPredicted RBP3.43□□□□□ -1.86
VPS9YML097C GDI1P39958 451 aaKnown RBP3.43□□□□□ -1.86
VPS9YML097C YJL043WP47053 257 aa3.43□□□□□ -1.86
VPS9YML097C ATP22P50273 684 aaPredicted RBP3.43□□□□□ -1.86
VPS9YML097C YGL117WP53133 265 aa3.43□□□□□ -1.86
VPS9YML097C VPS73P53142 486 aaKnown RBP3.43□□□□□ -1.86
VPS9YML097C MNP1P53163 194 aaPredicted RBP3.43□□□□□ -1.86
VPS9YML097C YGR016WP53209 190 aa3.43□□□□□ -1.86
VPS9YML097C BTN2P53286 410 aa3.43□□□□□ -1.86
VPS9YML097C IST1P53843 298 aaPredicted RBP3.43□□□□□ -1.86
VPS9YML097C TIM44Q01852 431 aa3.43□□□□□ -1.86
VPS9YML097C MEH1Q02205 184 aa3.43□□□□□ -1.86
VPS9YML097C PFA5Q03289 374 aa3.43□□□□□ -1.86
VPS9YML097C ARX1Q03862 593 aaKnown RBP3.43□□□□□ -1.86
VPS9YML097C ROY1Q04847 553 aa3.43□□□□□ -1.86
VPS9YML097C CYK3Q07533 885 aa3.43□□□□□ -1.86
VPS9YML097C LEA1Q08963 238 aaPredicted RBP3.43□□□□□ -1.86
VPS9YML097C YPL272CQ08984 517 aa3.43□□□□□ -1.86
VPS9YML097C RPL7AP05737 244 aaKnown RBP3.42□□□□□ -1.86
VPS9YML097C HEM1P09950 548 aaPredicted RBP3.42□□□□□ -1.86
VPS9YML097C APE1P14904 514 aa3.42□□□□□ -1.86
VPS9YML097C SPE2P21182 396 aa3.42□□□□□ -1.86
VPS9YML097C SSE2P32590 693 aaKnown RBP3.42□□□□□ -1.86
VPS9YML097C TOA1P32773 286 aa3.42□□□□□ -1.86
VPS9YML097C YME1P32795 747 aa3.42□□□□□ -1.86
VPS9YML097C WBP1P33767 430 aaKnown RBP3.42□□□□□ -1.86
VPS9YML097C TIF3P34167 436 aaKnown RBP3.42□□□□□ -1.86
VPS9YML097C YBR144CP34215 104 aa3.42□□□□□ -1.86
VPS9YML097C ICS2P38284 255 aa3.42□□□□□ -1.86
VPS9YML097C HXT14P42833 540 aa3.42□□□□□ -1.86
VPS9YML097C TWF1P53250 332 aa3.42□□□□□ -1.86
VPS9YML097C ATG9Q12142 997 aa3.42□□□□□ -1.86
VPS9YML097C RPL7BQ12213 244 aaKnown RBP3.42□□□□□ -1.86
VPS9YML097C PDH1Q12428 516 aaKnown RBP3.42□□□□□ -1.86
VPS9YML097C MDH1P17505 334 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
VPS9YML097C DMC1P25453 334 aa3.41□□□□□ -1.86
VPS9YML097C ANP1P32629 500 aa3.41□□□□□ -1.86
VPS9YML097C MUP3P38734 546 aa3.41□□□□□ -1.86
VPS9YML097C CAJ1P39101 391 aa3.41□□□□□ -1.86
VPS9YML097C SEC28P40509 296 aaKnown RBP3.41□□□□□ -1.86
VPS9YML097C OPT1P40897 799 aa3.41□□□□□ -1.86
VPS9YML097C HOS2P53096 452 aaPredicted RBP3.41□□□□□ -1.86
VPS9YML097C YGR127WP53275 312 aa3.41□□□□□ -1.86
VPS9YML097C CAF130P53280 1122 aaPredicted RBP3.41□□□□□ -1.86
VPS9YML097C YPR003CP53394 754 aa3.41□□□□□ -1.86
VPS9YML097C BOP3P53958 396 aa3.41□□□□□ -1.86
VPS9YML097C OAZ1Q02803 292 aa3.41□□□□□ -1.86
VPS9YML097C YDR286CQ05530 114 aa3.41□□□□□ -1.86
VPS9YML097C TEN1Q07921 160 aa3.41□□□□□ -1.86
VPS9YML097C YLR049CQ12110 428 aa3.41□□□□□ -1.86
VPS9YML097C LEU9Q12166 604 aaKnown RBP3.41□□□□□ -1.86
VPS9YML097C TAF3Q12297 353 aa3.41□□□□□ -1.86
VPS9YML097C PPH22P23595 377 aa3.4□□□□□ -1.86
VPS9YML097C AAD3P25612 363 aa3.4□□□□□ -1.86
VPS9YML097C YJU2P28320 278 aaPredicted RBP3.4□□□□□ -1.86
VPS9YML097C SYN8P31377 255 aa3.4□□□□□ -1.86
VPS9YML097C GSH1P32477 678 aa3.4□□□□□ -1.86
VPS9YML097C UGP1P32861 499 aaKnown RBP3.4□□□□□ -1.86
VPS9YML097C SNU114P36048 1008 aaKnown RBP3.4□□□□□ -1.86
VPS9YML097C ELO1P39540 310 aa3.4□□□□□ -1.86
VPS9YML097C UIP3P39547 235 aa3.4□□□□□ -1.86
VPS9YML097C PKP1P40530 394 aa3.4□□□□□ -1.86
VPS9YML097C FAR3P46671 204 aa3.4□□□□□ -1.86
VPS9YML097C DLD2P46681 530 aaKnown RBP3.4□□□□□ -1.86
VPS9YML097C GND2P53319 492 aa3.4□□□□□ -1.86
VPS9YML097C EFM6P53970 246 aa3.4□□□□□ -1.86
VPS9YML097C RPA49Q01080 415 aaPredicted RBP3.4□□□□□ -1.86
VPS9YML097C PEX25Q02969 394 aa3.4□□□□□ -1.86
VPS9YML097C PDS5Q04264 1277 aa3.4□□□□□ -1.86
VPS9YML097C RQC1Q05468 723 aaKnown RBP3.4□□□□□ -1.86
VPS9YML097C ECM30Q06673 1274 aa3.4□□□□□ -1.86
VPS9YML097C THI3Q07471 609 aa3.4□□□□□ -1.86
VPS9YML097C APL4Q12028 832 aa3.4□□□□□ -1.86
VPS9YML097C GPM3Q12326 303 aa3.4□□□□□ -1.86
VPS9YML097C BI2P03873 423 aa3.39□□□□□ -1.87
VPS9YML097C MRP2P10663 115 aaPredicted RBP3.39□□□□□ -1.87
VPS9YML097C RAP1P11938 827 aa3.39□□□□□ -1.87
VPS9YML097C ART10P18634 518 aaKnown RBP3.39□□□□□ -1.87
VPS9YML097C PMA2P19657 947 aa3.39□□□□□ -1.87
VPS9YML097C SAT4P25333 603 aaKnown RBP3.39□□□□□ -1.87
VPS9YML097C YCR006CP25350 157 aa3.39□□□□□ -1.87
VPS9YML097C PUP3P25451 205 aaKnown RBP3.39□□□□□ -1.87
VPS9YML097C URA7P28274 579 aaKnown RBP3.39□□□□□ -1.87
VPS9YML097C MRE11P32829 692 aa3.39□□□□□ -1.87
VPS9YML097C DBP8P38719 431 aa3.39□□□□□ -1.87
VPS9YML097C ANS1P38832 159 aa3.39□□□□□ -1.87
VPS9YML097C EXO1P39875 702 aa3.39□□□□□ -1.87
VPS9YML097C SDS3P40505 327 aa3.39□□□□□ -1.87
VPS9YML097C EFM4P40516 257 aa3.39□□□□□ -1.87
VPS9YML097C TCB2P48231 1178 aa3.39□□□□□ -1.87
VPS9YML097C VPS9P54787 451 aa3.39□□□□□ -1.87
VPS9YML097C SMF3Q12078 473 aaPredicted RBP3.39□□□□□ -1.87
VPS9YML097C MRH1Q12117 320 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms