RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C RPL42AP0CX27 106 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C RPL42BP0CX28 106 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C LCB1P25045 558 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C RFC1P38630 861 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C GND1P38720 489 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C LYS20P48570 428 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C GLO1P50107 326 aa2.21□□□□□ -2.06
SGD1YLR336C DIA3P52290 468 aa2.21□□□□□ -2.06
SGD1YLR336C SGF73P53165 657 aa2.21□□□□□ -2.06
SGD1YLR336C VPS75P53853 264 aa2.21□□□□□ -2.06
SGD1YLR336C VTC3Q02725 835 aa2.21□□□□□ -2.06
SGD1YLR336C YMR178WQ03219 274 aaKnown RBP2.21□□□□□ -2.06
SGD1YLR336C ARP9Q05123 467 aa2.21□□□□□ -2.06
SGD1YLR336C LUC7Q07508 261 aaPredicted RBP2.21□□□□□ -2.06
SGD1YLR336C CTI6Q08923 506 aa2.21□□□□□ -2.06
SGD1YLR336C ATX2Q12067 313 aa2.21□□□□□ -2.06
SGD1YLR336C YPR089WO13585 888 aa2.2□□□□□ -2.06
SGD1YLR336C AIM17P23180 465 aaKnown RBP2.2□□□□□ -2.06
SGD1YLR336C AGP2P38090 596 aa2.2□□□□□ -2.06
SGD1YLR336C TSC10P38342 320 aa2.2□□□□□ -2.06
SGD1YLR336C RGI2P40188 164 aa2.2□□□□□ -2.06
SGD1YLR336C PKP2P53170 491 aa2.2□□□□□ -2.06
SGD1YLR336C RBG2P53295 368 aaKnown RBP2.2□□□□□ -2.06
SGD1YLR336C TDA9Q04545 1251 aa2.2□□□□□ -2.06
SGD1YLR336C MFB1Q04922 465 aa2.2□□□□□ -2.06
SGD1YLR336C YEH1Q07804 573 aa2.2□□□□□ -2.06
SGD1YLR336C GEP3Q08622 556 aa2.2□□□□□ -2.06
SGD1YLR336C YPT6Q99260 215 aa2.2□□□□□ -2.06
SGD1YLR336C ADH7P25377 361 aa2.2□□□□□ -2.06
SGD1YLR336C YIH1P25637 258 aa2.2□□□□□ -2.06
SGD1YLR336C MIA40P36046 403 aa2.2□□□□□ -2.06
SGD1YLR336C NOP4P37838 685 aaKnown RBP2.2□□□□□ -2.06
SGD1YLR336C SRO77P38163 1010 aa2.2□□□□□ -2.06
SGD1YLR336C TOM71P38825 639 aaKnown RBP2.2□□□□□ -2.06
SGD1YLR336C SMC3P47037 1230 aa2.2□□□□□ -2.06
SGD1YLR336C IRC8P47046 822 aa2.2□□□□□ -2.06
SGD1YLR336C VPS25P47142 202 aa2.2□□□□□ -2.06
SGD1YLR336C EFM6P53970 246 aa2.2□□□□□ -2.06
SGD1YLR336C MDM1Q01846 1127 aa2.2□□□□□ -2.06
SGD1YLR336C DPB4Q04603 196 aaKnown RBP2.2□□□□□ -2.06
SGD1YLR336C ATG26Q06321 1198 aa2.2□□□□□ -2.06
SGD1YLR336C GRC3Q07845 632 aa2.2□□□□□ -2.06
SGD1YLR336C BUD7Q08754 746 aa2.2□□□□□ -2.06
SGD1YLR336C CBS1P14066 229 aa2.19□□□□□ -2.06
SGD1YLR336C EST1P17214 699 aaPredicted RBP2.19□□□□□ -2.06
SGD1YLR336C CMK1P27466 446 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C TIF3P34167 436 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C YKL050CP35736 922 aa2.19□□□□□ -2.06
SGD1YLR336C SCO2P38072 301 aa2.19□□□□□ -2.06
SGD1YLR336C YMR124WP39523 943 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C MAF1P41910 395 aa2.19□□□□□ -2.06
SGD1YLR336C SGM1P47166 707 aa2.19□□□□□ -2.06
SGD1YLR336C BUD22Q04347 519 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C POS5Q06892 414 aa2.19□□□□□ -2.06
SGD1YLR336C TEN1Q07921 160 aa2.19□□□□□ -2.06
SGD1YLR336C GSH2Q08220 491 aa2.19□□□□□ -2.06
SGD1YLR336C APL4Q12028 832 aa2.19□□□□□ -2.06
SGD1YLR336C LEU9Q12166 604 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C CBP1P07252 654 aa2.19□□□□□ -2.06
SGD1YLR336C MRP13P12686 339 aa2.19□□□□□ -2.06
SGD1YLR336C PUP3P25451 205 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C PEP3P27801 918 aa2.19□□□□□ -2.06
SGD1YLR336C SSE2P32590 693 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C YEL057CP39983 233 aa2.19□□□□□ -2.06
SGD1YLR336C RMD8P43620 662 aa2.19□□□□□ -2.06
SGD1YLR336C HOS2P53096 452 aaPredicted RBP2.19□□□□□ -2.06
SGD1YLR336C MSC1Q03104 513 aa2.19□□□□□ -2.06
SGD1YLR336C IZH1Q03419 316 aa2.19□□□□□ -2.06
SGD1YLR336C EMI2Q04409 500 aaKnown RBP2.19□□□□□ -2.06
SGD1YLR336C RCN2Q12044 265 aa2.19□□□□□ -2.06
SGD1YLR336C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SGD1YLR336C RTP1Q12751 981 aa2.19□□□□□ -2.06
SGD1YLR336C EDE1P34216 1381 aa2.19□□□□□ -2.06
SGD1YLR336C SGS1P35187 1447 aa2.19□□□□□ -2.06
SGD1YLR336C GCN4P03069 281 aa2.19□□□□□ -2.06
SGD1YLR336C SPE2P21182 396 aa2.19□□□□□ -2.06
SGD1YLR336C UBP11P36026 717 aa2.19□□□□□ -2.06
SGD1YLR336C AFG3P39925 761 aa2.19□□□□□ -2.06
SGD1YLR336C SPO22P40511 975 aa2.19□□□□□ -2.06
SGD1YLR336C ESBP6P53918 673 aa2.19□□□□□ -2.06
SGD1YLR336C ARP10Q04549 284 aa2.19□□□□□ -2.06
SGD1YLR336C YDL218WQ07629 317 aa2.19□□□□□ -2.06
SGD1YLR336C MF(ALPHA)1P01149 165 aa2.18□□□□□ -2.06
SGD1YLR336C ARG3P05150 338 aa2.18□□□□□ -2.06
SGD1YLR336C SNF3P10870 884 aa2.18□□□□□ -2.06
SGD1YLR336C IMG1P25626 169 aa2.18□□□□□ -2.06
SGD1YLR336C YBR144CP34215 104 aa2.18□□□□□ -2.06
SGD1YLR336C YBL055CP34220 418 aaPredicted RBP2.18□□□□□ -2.06
SGD1YLR336C NUP133P36161 1157 aa2.18□□□□□ -2.06
SGD1YLR336C UBA4P38820 440 aa2.18□□□□□ -2.06
SGD1YLR336C VRG4P40107 337 aa2.18□□□□□ -2.06
SGD1YLR336C IRC6P43615 237 aa2.18□□□□□ -2.06
SGD1YLR336C APT1P49435 187 aaKnown RBP2.18□□□□□ -2.06
SGD1YLR336C PYK2P52489 506 aaKnown RBP2.18□□□□□ -2.06
SGD1YLR336C ERG26P53199 349 aaKnown RBP2.18□□□□□ -2.06
SGD1YLR336C SCW4P53334 386 aaKnown RBP2.18□□□□□ -2.06
SGD1YLR336C RSM23Q01163 450 aa2.18□□□□□ -2.06
SGD1YLR336C INH1P01097 85 aa2.18□□□□□ -2.06
SGD1YLR336C PUT2P07275 575 aa2.18□□□□□ -2.06
SGD1YLR336C MRP7P12687 371 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms