RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YHR097CP38809 366 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C PRM9P39551 298 aa5.8□□□□□ -1.48
SSK1YLR006C SAW1P39735 261 aa5.8□□□□□ -1.48
SSK1YLR006C PFK26P40433 827 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C GVP36P40531 326 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C SNZ3P43545 298 aa5.8□□□□□ -1.48
SSK1YLR006C LIA1P47120 325 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C PAN2P53010 1115 aaPredicted RBP5.8□□□□□ -1.48
SSK1YLR006C MNT2P53059 558 aa5.8□□□□□ -1.48
SSK1YLR006C MCM6P53091 1017 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C RTT102P53330 157 aa5.8□□□□□ -1.48
SSK1YLR006C BIO4P53630 237 aa5.8□□□□□ -1.48
SSK1YLR006C SNZ2P53824 298 aa5.8□□□□□ -1.48
SSK1YLR006C STE20Q03497 939 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C RTT103Q05543 409 aa5.8□□□□□ -1.48
SSK1YLR006C ECM22Q05958 814 aaPredicted RBP5.8□□□□□ -1.48
SSK1YLR006C CDC73Q06697 393 aa5.8□□□□□ -1.48
SSK1YLR006C SMC5Q08204 1093 aa5.8□□□□□ -1.48
SSK1YLR006C GPN2Q08726 347 aaPredicted RBP5.8□□□□□ -1.48
SSK1YLR006C ATG29Q12092 213 aa5.8□□□□□ -1.48
SSK1YLR006C YDR018CQ12185 396 aa5.8□□□□□ -1.48
SSK1YLR006C OCA6Q12454 224 aa5.8□□□□□ -1.48
SSK1YLR006C AI5_BETAQ9ZZX0 354 aa5.8□□□□□ -1.48
SSK1YLR006C APA2P22108 325 aa5.8□□□□□ -1.48
SSK1YLR006C CLB3P24870 427 aa5.8□□□□□ -1.48
SSK1YLR006C RRT12P25381 491 aa5.8□□□□□ -1.48
SSK1YLR006C HXT4P32467 576 aa5.8□□□□□ -1.48
SSK1YLR006C CDC12P32468 407 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C COT1P32798 439 aa5.8□□□□□ -1.48
SSK1YLR006C SLC1P33333 303 aa5.8□□□□□ -1.48
SSK1YLR006C TGL1P34163 548 aa5.8□□□□□ -1.48
SSK1YLR006C TIF3P34167 436 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C APM3P38153 483 aa5.8□□□□□ -1.48
SSK1YLR006C ALG5P40350 334 aa5.8□□□□□ -1.48
SSK1YLR006C SMK1P41808 388 aa5.8□□□□□ -1.48
SSK1YLR006C DLD2P46681 530 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C ALY2P47029 1046 aa5.8□□□□□ -1.48
SSK1YLR006C ASN1P49089 572 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C ORC5P50874 479 aa5.8□□□□□ -1.48
SSK1YLR006C PDR16P53860 351 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C EOS1P53938 366 aa5.8□□□□□ -1.48
SSK1YLR006C PPM1Q04081 328 aa5.8□□□□□ -1.48
SSK1YLR006C PEX15Q08215 383 aa5.8□□□□□ -1.48
SSK1YLR006C GUP2Q08929 609 aa5.8□□□□□ -1.48
SSK1YLR006C ECM3Q99252 613 aa5.8□□□□□ -1.48
SSK1YLR006C RPS3P05750 240 aaKnown RBP5.79□□□□□ -1.48
SSK1YLR006C ARO3P14843 370 aaKnown RBP5.79□□□□□ -1.48
SSK1YLR006C FUS3P16892 353 aaKnown RBP5.79□□□□□ -1.48
SSK1YLR006C YCL049CP25577 312 aa5.79□□□□□ -1.48
SSK1YLR006C IFA38P38286 347 aa5.79□□□□□ -1.48
SSK1YLR006C SHC1P39000 512 aa5.79□□□□□ -1.48
SSK1YLR006C SIP5P40210 489 aaKnown RBP5.79□□□□□ -1.48
SSK1YLR006C ARF3P40994 183 aaRIP-Chip data5.79□□□□□ -1.48not detected
SSK1YLR006C YFL052WP43551 465 aa5.79□□□□□ -1.48
SSK1YLR006C BPL1P48445 690 aaPredicted RBP5.79□□□□□ -1.48
SSK1YLR006C USE1P53146 245 aa5.79□□□□□ -1.48
SSK1YLR006C SAM50P53969 484 aa5.79□□□□□ -1.48
SSK1YLR006C ADI1Q03677 179 aa5.79□□□□□ -1.48
SSK1YLR006C RRP17Q04031 235 aaPredicted RBP5.79□□□□□ -1.48
SSK1YLR006C NGL1Q08213 363 aaKnown RBP5.79□□□□□ -1.48
SSK1YLR006C RKM1Q08961 583 aaPredicted RBP5.79□□□□□ -1.48
SSK1YLR006C RUP1Q12242 671 aa5.79□□□□□ -1.48
SSK1YLR006C TRM11Q12463 433 aa5.79□□□□□ -1.48
SSK1YLR006C BI2P03873 423 aa5.78□□□□□ -1.48
SSK1YLR006C PYC2P32327 1180 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C TDA11P38854 504 aa5.78□□□□□ -1.48
SSK1YLR006C HXT6P39003 570 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C HXT7P39004 570 aa5.78□□□□□ -1.48
SSK1YLR006C PSD1P39006 500 aa5.78□□□□□ -1.48
SSK1YLR006C YRB2P40517 327 aa5.78□□□□□ -1.48
SSK1YLR006C MSS2P40990 351 aa5.78□□□□□ -1.48
SSK1YLR006C COS6P53344 381 aa5.78□□□□□ -1.48
SSK1YLR006C BRE5P53741 515 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C YNL146WP53906 100 aa5.78□□□□□ -1.48
SSK1YLR006C YLR456WQ06199 204 aa5.78□□□□□ -1.48
SSK1YLR006C IES4Q08561 116 aa5.78□□□□□ -1.48
SSK1YLR006C TRE1Q08919 783 aa5.78□□□□□ -1.48
SSK1YLR006C OSW2Q12202 724 aa5.78□□□□□ -1.48
SSK1YLR006C BI3Q9ZZW7 517 aa5.78□□□□□ -1.48
SSK1YLR006C CDC36P06100 191 aaPredicted RBP5.78□□□□□ -1.48
SSK1YLR006C FUM1P08417 488 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C MET3P08536 511 aa5.78□□□□□ -1.48
SSK1YLR006C HEM13P11353 328 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C YPK2P18961 677 aa5.78□□□□□ -1.48
SSK1YLR006C SLY1P22213 666 aa5.78□□□□□ -1.48
SSK1YLR006C RPI1P23250 407 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C MCR1P36060 302 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C ETR1P38071 380 aa5.78□□□□□ -1.48
SSK1YLR006C HSL7P38274 827 aa5.78□□□□□ -1.48
SSK1YLR006C MUP3P38734 546 aa5.78□□□□□ -1.48
SSK1YLR006C VMA13P41807 478 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C SUT1P53032 299 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C GPD1Q00055 391 aaKnown RBP5.78□□□□□ -1.48
SSK1YLR006C SMA1Q02651 245 aa5.78□□□□□ -1.48
SSK1YLR006C ACL4Q03771 387 aa5.78□□□□□ -1.48
SSK1YLR006C ARP10Q04549 284 aa5.78□□□□□ -1.48
SSK1YLR006C YCS4Q06156 1176 aa5.78□□□□□ -1.48
SSK1YLR006C GUD1Q07729 489 aa5.78□□□□□ -1.48
SSK1YLR006C LDB17Q12342 491 aa5.78□□□□□ -1.48
SSK1YLR006C ECM29P38737 1868 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms