RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	RSC3	Q06639	885 aa		10.09	□□□□□ -0.79
SHB17	YKR043C	KCS1	Q12494	1050 aa		10.09	□□□□□ -0.79
SHB17	YKR043C	IRA2	P19158	3079 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	PHO5	P00635	467 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	10.08	□□□□□ -0.8	not detected
SHB17	YKR043C	PPH21	P23594	369 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	RSC6	P25632	483 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	MSH1	P25846	959 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	YHR020W	P38708	688 aa	Known RBP	10.08	□□□□□ -0.8
SHB17	YKR043C	HSE1	P38753	452 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	YHR182W	P38870	785 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	REV7	P38927	245 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	FAA3	P39002	694 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	TFG1	P41895	735 aa	Predicted RBP	10.08	□□□□□ -0.8
SHB17	YKR043C	GAT1	P43574	510 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	BOL2	P53082	120 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	SSL1	Q04673	461 aa	Predicted RBP	10.08	□□□□□ -0.8
SHB17	YKR043C	STE23	Q06010	1027 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	YLR177W	Q06251	628 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	RKM5	Q12367	367 aa		10.08	□□□□□ -0.8
SHB17	YKR043C	SWI5	P08153	709 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	FUM1	P08417	488 aa	Known RBP	10.07	□□□□□ -0.8
SHB17	YKR043C	RPL1A	P0CX43	217 aa	Known RBP	10.07	□□□□□ -0.8
SHB17	YKR043C	RPL1B	P0CX44	217 aa	Known RBP	10.07	□□□□□ -0.8
SHB17	YKR043C	RED1	P14291	827 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	TRX2	P22803	104 aa	Known RBP	10.07	□□□□□ -0.8
SHB17	YKR043C	RPF2	P36160	344 aa	Known RBP	10.07	□□□□□ -0.8
SHB17	YKR043C	DED81	P38707	554 aa	Known RBP	10.07	□□□□□ -0.8
SHB17	YKR043C	ECM9	Q02202	377 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	YMR209C	Q03648	457 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	TRM12	Q04235	462 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	CRN1	Q06440	651 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	RGS2	Q99188	309 aa		10.07	□□□□□ -0.8
SHB17	YKR043C	YAR066W	P0CX18	203 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	YHR214W	P0CX19	203 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	YPT52	P36018	234 aa	Known RBP	10.06	□□□□□ -0.8
SHB17	YKR043C	RRP14	P36080	434 aa	Known RBP	10.06	□□□□□ -0.8
SHB17	YKR043C	SET3	P36124	751 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	EFM1	P38732	585 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	MUP3	P38734	546 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	UBA4	P38820	440 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	10.06	□□□□□ -0.8	not detected
SHB17	YKR043C	SAP1	P39955	897 aa	Known RBP	10.06	□□□□□ -0.8
SHB17	YKR043C	UTP18	P40362	594 aa	Predicted RBP	10.06	□□□□□ -0.8
SHB17	YKR043C	ZIM17	P42844	174 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	TY4A-J	P47023	414 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	GRS2	Q06817	618 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	ALR1	Q08269	859 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	PFA4	Q12006	378 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	UBX3	Q12229	455 aa		10.06	□□□□□ -0.8
SHB17	YKR043C	ATP11	P32453	318 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	MUD2	P36084	527 aa	Known RBP	10.05	□□□□□ -0.8
SHB17	YKR043C	MRPL37	P36532	105 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	PIM1	P36775	1133 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	YJL206C	P39529	758 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	YAL037W	P39728	267 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	PEP8	P40335	379 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	FET5	P43561	622 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	HXT16	P47185	567 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	HXT15	P54854	567 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	RNY1	Q02933	434 aa	Known RBP	10.05	□□□□□ -0.8
SHB17	YKR043C	GOT1	Q03554	138 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	TAF11	Q04226	346 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	UTP13	Q05946	817 aa	Known RBP	10.05	□□□□□ -0.8
SHB17	YKR043C	TDA5	Q06417	326 aa	Known RBP	10.05	□□□□□ -0.8
SHB17	YKR043C	YLR053C	Q12026	108 aa		10.05	□□□□□ -0.8
SHB17	YKR043C	AAD3	P25612	363 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	PTM1	P32857	523 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	GIM4	P40005	111 aa	Known RBP	10.04	□□□□□ -0.8
SHB17	YKR043C	SSU1	P41930	458 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	CLD1	P53264	445 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	HST3	P53687	447 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	CSN9	Q03981	162 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	SPO20	Q04359	397 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	BNA5	Q05979	453 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	CHS5	Q12114	671 aa	Known RBP	10.04	□□□□□ -0.8
SHB17	YKR043C	NHA1	Q99271	985 aa		10.04	□□□□□ -0.8
SHB17	YKR043C	SEN1	Q00416	2231 aa	Known RBP	10.04	□□□□□ -0.8
SHB17	YKR043C	PHA2	P32452	334 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	YHR045W	P38775	560 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	MEP1	P40260	492 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	PFA3	P42836	336 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	DUG1	P43616	481 aa	Known RBP	10.03	□□□□□ -0.8
SHB17	YKR043C	GCD14	P46959	383 aa	Predicted RBP	10.03	□□□□□ -0.8
SHB17	YKR043C	TIS11	P47977	285 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	ROT1	Q03691	256 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	TAF12	Q03761	539 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	HPT1	Q04178	221 aa	Known RBP	10.03	□□□□□ -0.8
SHB17	YKR043C	VHS3	Q08438	674 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	MDY2	Q12285	212 aa		10.03	□□□□□ -0.8
SHB17	YKR043C	DEF1	P35732	738 aa	Known RBP	10.02	□□□□□ -0.81
SHB17	YKR043C	OAF3	P36023	863 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	OCA5	P38738	679 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	CEM1	P39525	442 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	MGS1	P40151	587 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	YAT1	P80235	687 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	AAT1	Q01802	451 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	EGD1	Q02642	157 aa	Known RBP	10.02	□□□□□ -0.81
SHB17	YKR043C	PST1	Q12355	444 aa		10.02	□□□□□ -0.81
SHB17	YKR043C	CDC21	P06785	304 aa		10.01	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms