RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C TUB1P09733 447 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C CMK2P22517 447 aa2.15□□□□□ -2.07
UFD4YKL010C RMA1P36001 430 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C YKR051WP36142 418 aa2.15□□□□□ -2.07
UFD4YKL010C FLO10P36170 1169 aa2.15□□□□□ -2.07
UFD4YKL010C HSL7P38274 827 aa2.15□□□□□ -2.07
UFD4YKL010C BIT2P38346 545 aa2.15□□□□□ -2.07
UFD4YKL010C YHL008CP38750 627 aa2.15□□□□□ -2.07
UFD4YKL010C AIM20P40451 204 aa2.15□□□□□ -2.07
UFD4YKL010C MPH1P40562 993 aa2.15□□□□□ -2.07
UFD4YKL010C ATP22P50273 684 aaPredicted RBP2.15□□□□□ -2.07
UFD4YKL010C NOP19P53317 196 aaPredicted RBP2.15□□□□□ -2.07
UFD4YKL010C MPS1P54199 764 aa2.15□□□□□ -2.07
UFD4YKL010C SPR6Q01684 191 aa2.15□□□□□ -2.07
UFD4YKL010C HOT1Q03213 719 aa2.15□□□□□ -2.07
UFD4YKL010C PFA5Q03289 374 aa2.15□□□□□ -2.07
UFD4YKL010C RSM28Q03430 361 aa2.15□□□□□ -2.07
UFD4YKL010C RRP15Q06511 250 aaPredicted RBP2.15□□□□□ -2.07
UFD4YKL010C AAD15Q08361 143 aa2.15□□□□□ -2.07
UFD4YKL010C UAF30Q08747 228 aa2.15□□□□□ -2.07
UFD4YKL010C ENO1P00924 437 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C TPK3P05986 398 aa2.15□□□□□ -2.07
UFD4YKL010C CLN1P20437 546 aa2.15□□□□□ -2.07
UFD4YKL010C NPP1P25353 742 aa2.15□□□□□ -2.07
UFD4YKL010C RSA4P25382 515 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C PRR1P28708 518 aa2.15□□□□□ -2.07
UFD4YKL010C HXT3P32466 567 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C KAR9P32526 644 aa2.15□□□□□ -2.07
UFD4YKL010C HCS1P34243 683 aa2.15□□□□□ -2.07
UFD4YKL010C SCD5P34758 872 aa2.15□□□□□ -2.07
UFD4YKL010C PHO11P35842 467 aa2.15□□□□□ -2.07
UFD4YKL010C GPT2P36148 743 aa2.15□□□□□ -2.07
UFD4YKL010C ECM8P38246 354 aa2.15□□□□□ -2.07
UFD4YKL010C PHO12P38693 467 aa2.15□□□□□ -2.07
UFD4YKL010C YHR202WP38887 602 aa2.15□□□□□ -2.07
UFD4YKL010C TVP23P38962 199 aa2.15□□□□□ -2.07
UFD4YKL010C PNT1P38969 423 aa2.15□□□□□ -2.07
UFD4YKL010C ERV46P39727 415 aa2.15□□□□□ -2.07
UFD4YKL010C UBP6P43593 499 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C STE24P47154 453 aa2.15□□□□□ -2.07
UFD4YKL010C YNL095CP53932 642 aa2.15□□□□□ -2.07
UFD4YKL010C PRP38Q00723 242 aaPredicted RBP2.15□□□□□ -2.07
UFD4YKL010C SWP1Q02795 286 aa2.15□□□□□ -2.07
UFD4YKL010C ATP25Q03153 612 aa2.15□□□□□ -2.07
UFD4YKL010C HEH2Q03281 663 aa2.15□□□□□ -2.07
UFD4YKL010C NBP2Q12163 236 aa2.15□□□□□ -2.07
UFD4YKL010C MET8P15807 274 aa2.14□□□□□ -2.07
UFD4YKL010C PHO84P25297 587 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C OCA4P25366 362 aa2.14□□□□□ -2.07
UFD4YKL010C EMC1P25574 760 aa2.14□□□□□ -2.07
UFD4YKL010C POL4P25615 582 aa2.14□□□□□ -2.07
UFD4YKL010C BUD23P25627 275 aaPredicted RBP2.14□□□□□ -2.07
UFD4YKL010C GAC1P28006 793 aa2.14□□□□□ -2.07
UFD4YKL010C PEX5P35056 612 aa2.14□□□□□ -2.07
UFD4YKL010C RCN1P36054 211 aa2.14□□□□□ -2.07
UFD4YKL010C MRPL7P36519 292 aa2.14□□□□□ -2.07
UFD4YKL010C YPK3P38070 525 aa2.14□□□□□ -2.07
UFD4YKL010C GCD10P41814 478 aa2.14□□□□□ -2.07
UFD4YKL010C BST1P43571 1029 aa2.14□□□□□ -2.07
UFD4YKL010C MTR3P48240 250 aaPredicted RBP2.14□□□□□ -2.07
UFD4YKL010C VMA10P48836 114 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C ORM1P53224 222 aa2.14□□□□□ -2.07
UFD4YKL010C SHY1P53266 389 aa2.14□□□□□ -2.07
UFD4YKL010C ARC35P53731 342 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C DSL1P53847 754 aa2.14□□□□□ -2.07
UFD4YKL010C YNL181WP53878 407 aa2.14□□□□□ -2.07
UFD4YKL010C COG5P53951 403 aa2.14□□□□□ -2.07
UFD4YKL010C TMA20P89886 181 aaPredicted RBP2.14□□□□□ -2.07
UFD4YKL010C NUP100Q02629 959 aa2.14□□□□□ -2.07
UFD4YKL010C YMR209CQ03648 457 aa2.14□□□□□ -2.07
UFD4YKL010C YMR155WQ03795 547 aa2.14□□□□□ -2.07
UFD4YKL010C ARA2Q04212 335 aa2.14□□□□□ -2.07
UFD4YKL010C SPO20Q04359 397 aa2.14□□□□□ -2.07
UFD4YKL010C DYN3Q04949 312 aa2.14□□□□□ -2.07
UFD4YKL010C YDR056CQ12025 205 aa2.14□□□□□ -2.07
UFD4YKL010C YLL058WQ12198 575 aa2.14□□□□□ -2.07
UFD4YKL010C TIF6Q12522 245 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C MAS2P11914 482 aa2.14□□□□□ -2.07
UFD4YKL010C SEC15P22224 910 aa2.14□□□□□ -2.07
UFD4YKL010C YHL041WP38730 149 aa2.14□□□□□ -2.07
UFD4YKL010C CYC2P38909 366 aa2.14□□□□□ -2.07
UFD4YKL010C ALP1P38971 573 aa2.14□□□□□ -2.07
UFD4YKL010C PIK1P39104 1066 aa2.14□□□□□ -2.07
UFD4YKL010C AFG3P39925 761 aa2.14□□□□□ -2.07
UFD4YKL010C ESL1P40456 1118 aa2.14□□□□□ -2.07
UFD4YKL010C FMP32P43557 207 aa2.14□□□□□ -2.07
UFD4YKL010C TRF5P48561 642 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C NRD1P53617 575 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
UFD4YKL010C CUS2P53830 285 aaPredicted RBP2.14□□□□□ -2.07
UFD4YKL010C ASI2P53895 289 aa2.14□□□□□ -2.07
UFD4YKL010C SIW14P53965 281 aa2.14□□□□□ -2.07
UFD4YKL010C SED5Q01590 340 aa2.14□□□□□ -2.07
UFD4YKL010C ULP1Q02724 621 aa2.14□□□□□ -2.07
UFD4YKL010C RLI1Q03195 608 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C RSM24Q03976 319 aa2.14□□□□□ -2.07
UFD4YKL010C GPI17Q04080 534 aa2.14□□□□□ -2.07
UFD4YKL010C FAR10Q06001 478 aa2.14□□□□□ -2.07
UFD4YKL010C MCP2Q06567 569 aa2.14□□□□□ -2.07
UFD4YKL010C CLP1Q08685 445 aaPredicted RBP2.14□□□□□ -2.07
UFD4YKL010C MSC6Q08818 692 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms