RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W PTM1P32857 523 aa7.47□□□□□ -1.21
PEX28YHR150W TYE7P33122 291 aaPredicted RBP7.47□□□□□ -1.21
PEX28YHR150W RIB7P33312 244 aa7.47□□□□□ -1.21
PEX28YHR150W MRP8P35719 219 aa7.47□□□□□ -1.21
PEX28YHR150W KTR4P38131 464 aa7.47□□□□□ -1.21
PEX28YHR150W IST2P38250 946 aa7.47□□□□□ -1.21
PEX28YHR150W YBR285WP38354 144 aa7.47□□□□□ -1.21
PEX28YHR150W MSC7P38694 644 aa7.47□□□□□ -1.21
PEX28YHR150W ELO3P40319 345 aa7.47□□□□□ -1.21
PEX28YHR150W SNG1P46950 547 aa7.47□□□□□ -1.21
PEX28YHR150W RMR1P53060 241 aa7.47□□□□□ -1.21
PEX28YHR150W TRM112P53738 135 aaPredicted RBP7.47□□□□□ -1.21
PEX28YHR150W GAS3Q03655 524 aa7.47□□□□□ -1.21
PEX28YHR150W YDR239CQ03780 787 aa7.47□□□□□ -1.21
PEX28YHR150W GGA1Q06336 557 aa7.47□□□□□ -1.21
PEX28YHR150W YOL159CQ08300 171 aa7.47□□□□□ -1.21
PEX28YHR150W ATG34Q12292 412 aa7.47□□□□□ -1.21
PEX28YHR150W RHO1P06780 209 aaKnown RBP7.46□□□□□ -1.22
PEX28YHR150W RPT5P33297 434 aaKnown RBP7.46□□□□□ -1.22
PEX28YHR150W RFS1P38234 210 aaKnown RBP7.46□□□□□ -1.22
PEX28YHR150W FES1P38260 290 aa7.46□□□□□ -1.22
PEX28YHR150W GIP4P39732 760 aa7.46□□□□□ -1.22
PEX28YHR150W ARB1P40024 610 aaKnown RBP7.46□□□□□ -1.22
PEX28YHR150W RIC1P40395 1056 aa7.46□□□□□ -1.22
PEX28YHR150W YIR016WP40572 265 aa7.46□□□□□ -1.22
PEX28YHR150W IMA5P40884 581 aa7.46□□□□□ -1.22
PEX28YHR150W UFE1P41834 346 aa7.46□□□□□ -1.22
PEX28YHR150W PRP24P49960 444 aaKnown RBP7.46□□□□□ -1.22
PEX28YHR150W RPA14P50106 137 aa7.46□□□□□ -1.22
PEX28YHR150W GTR2P53290 341 aa7.46□□□□□ -1.22
PEX28YHR150W ECM9Q02202 377 aa7.46□□□□□ -1.22
PEX28YHR150W RSC4Q02206 625 aa7.46□□□□□ -1.22
PEX28YHR150W REH1Q06709 432 aa7.46□□□□□ -1.22
PEX28YHR150W RPN8Q08723 338 aaKnown RBP7.46□□□□□ -1.22
PEX28YHR150W MNL2Q12205 849 aa7.46□□□□□ -1.22
PEX28YHR150W SAS5Q99314 248 aa7.46□□□□□ -1.22
PEX28YHR150W SUC2P00724 532 aa7.45□□□□□ -1.22
PEX28YHR150W SEC53P07283 254 aaKnown RBP7.45□□□□□ -1.22
PEX28YHR150W UGA1P17649 471 aa7.45□□□□□ -1.22
PEX28YHR150W ACO1P19414 778 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
PEX28YHR150W RPB4P20433 221 aaPredicted RBP7.45□□□□□ -1.22
PEX28YHR150W YCK2P23292 546 aaKnown RBP7.45□□□□□ -1.22
PEX28YHR150W DBR1P24309 405 aaKnown RBP7.45□□□□□ -1.22
PEX28YHR150W POL4P25615 582 aa7.45□□□□□ -1.22
PEX28YHR150W ATO2P32907 282 aa7.45□□□□□ -1.22
PEX28YHR150W FUI1P38196 639 aa7.45□□□□□ -1.22
PEX28YHR150W MUP3P38734 546 aa7.45□□□□□ -1.22
PEX28YHR150W VAC8P39968 578 aa7.45□□□□□ -1.22
PEX28YHR150W HAT2P39984 401 aa7.45□□□□□ -1.22
PEX28YHR150W YRB2P40517 327 aa7.45□□□□□ -1.22
PEX28YHR150W IRR1P40541 1150 aa7.45□□□□□ -1.22
PEX28YHR150W YIR007WP40566 764 aa7.45□□□□□ -1.22
PEX28YHR150W ELP2P42935 788 aa7.45□□□□□ -1.22
PEX28YHR150W AGP3P43548 558 aa7.45□□□□□ -1.22
PEX28YHR150W DLD2P46681 530 aaKnown RBP7.45□□□□□ -1.22
PEX28YHR150W BOL2P53082 120 aa7.45□□□□□ -1.22
PEX28YHR150W YKR005CQ02203 525 aa7.45□□□□□ -1.22
PEX28YHR150W RIF2Q06208 395 aa7.45□□□□□ -1.22
PEX28YHR150W MCM21Q06675 368 aa7.45□□□□□ -1.22
PEX28YHR150W LDB18Q07887 179 aa7.45□□□□□ -1.22
PEX28YHR150W NDJ1Q12366 352 aa7.45□□□□□ -1.22
PEX28YHR150W LPX1Q12405 387 aaKnown RBP7.45□□□□□ -1.22
PEX28YHR150W HEM2P05373 342 aa7.44□□□□□ -1.22
PEX28YHR150W PHO91P27514 894 aa7.44□□□□□ -1.22
PEX28YHR150W SAC1P32368 623 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W PEP7P32609 515 aa7.44□□□□□ -1.22
PEX28YHR150W UTP11P34247 250 aaPredicted RBP7.44□□□□□ -1.22
PEX28YHR150W DEF1P35732 738 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W YKR051WP36142 418 aa7.44□□□□□ -1.22
PEX28YHR150W TFA2P36145 328 aa7.44□□□□□ -1.22
PEX28YHR150W SKG1P36169 355 aa7.44□□□□□ -1.22
PEX28YHR150W YEN1P40028 759 aa7.44□□□□□ -1.22
PEX28YHR150W BTT1P40314 149 aaPredicted RBP7.44□□□□□ -1.22
PEX28YHR150W YFL052WP43551 465 aa7.44□□□□□ -1.22
PEX28YHR150W EFM5P53200 248 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W COQ6P53318 479 aa7.44□□□□□ -1.22
PEX28YHR150W PET117Q02771 107 aa7.44□□□□□ -1.22
PEX28YHR150W YLR257WQ06146 321 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W DTD1Q07648 150 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W PSR1Q07800 427 aa7.44□□□□□ -1.22
PEX28YHR150W YOL019WQ08157 551 aa7.44□□□□□ -1.22
PEX28YHR150W NUS1Q12063 375 aa7.44□□□□□ -1.22
PEX28YHR150W FBA1P14540 359 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W AMD1P15274 810 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W PHO81P17442 1178 aa7.44□□□□□ -1.22
PEX28YHR150W ERG6P25087 383 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W CTR86P25355 563 aa7.44□□□□□ -1.22
PEX28YHR150W YCR099CP25657 155 aa7.44□□□□□ -1.22
PEX28YHR150W CYS4P32582 507 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W SSE2P32590 693 aaKnown RBP7.44□□□□□ -1.22
PEX28YHR150W SKT5P34226 696 aa7.44□□□□□ -1.22
PEX28YHR150W TOM20P35180 183 aa7.44□□□□□ -1.22
PEX28YHR150W MAK5P38112 773 aaPredicted RBP7.44□□□□□ -1.22
PEX28YHR150W ROT2P38138 954 aa7.44□□□□□ -1.22
PEX28YHR150W ECM13P38195 257 aa7.44□□□□□ -1.22
PEX28YHR150W YHL041WP38730 149 aa7.44□□□□□ -1.22
PEX28YHR150W FAD1P38913 306 aa7.44□□□□□ -1.22
PEX28YHR150W DSS1P39112 969 aa7.44□□□□□ -1.22
PEX28YHR150W AVT6P40074 448 aa7.44□□□□□ -1.22
PEX28YHR150W RRD1P40454 393 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms