RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W RRI1Q12468 440 aa2.43□□□□□ -2.02
TRA1YHR099W RPL5P26321 297 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W COQ8P27697 501 aa2.43□□□□□ -2.02
TRA1YHR099W PHD1P36093 366 aa2.43□□□□□ -2.02
TRA1YHR099W RPF1P38805 295 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W GIP4P39732 760 aa2.43□□□□□ -2.02
TRA1YHR099W REX2P54964 269 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W MTD1Q02046 320 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W GIS1Q03833 894 aa2.43□□□□□ -2.02
TRA1YHR099W RKM2Q03942 479 aa2.43□□□□□ -2.02
TRA1YHR099W ARA2Q04212 335 aa2.43□□□□□ -2.02
TRA1YHR099W YDR338CQ05497 695 aa2.43□□□□□ -2.02
TRA1YHR099W GPI10P30777 616 aa2.43□□□□□ -2.02
TRA1YHR099W PTM1P32857 523 aa2.43□□□□□ -2.02
TRA1YHR099W OPY1P38271 328 aa2.43□□□□□ -2.02
TRA1YHR099W GEM1P39722 662 aa2.43□□□□□ -2.02
TRA1YHR099W COX15P40086 486 aa2.43□□□□□ -2.02
TRA1YHR099W RSN1Q03516 953 aa2.43□□□□□ -2.02
TRA1YHR099W EMG1Q06287 252 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W GAS4Q08271 471 aa2.43□□□□□ -2.02
TRA1YHR099W TFB5Q3E7C1 72 aaPredicted RBP2.43□□□□□ -2.02
TRA1YHR099W SEC4P07560 215 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W GAL2P13181 574 aa2.43□□□□□ -2.02
TRA1YHR099W SPT15P13393 240 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W NSP1P14907 823 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W PCL1P24867 279 aa2.43□□□□□ -2.02
TRA1YHR099W EAF5P39995 279 aa2.43□□□□□ -2.02
TRA1YHR099W ICP55P40051 511 aa2.43□□□□□ -2.02
TRA1YHR099W FKH1P40466 484 aa2.43□□□□□ -2.02
TRA1YHR099W COS4P43542 379 aa2.43□□□□□ -2.02
TRA1YHR099W SEH1P53011 349 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W DAK1P54838 584 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W RIM13Q03792 727 aa2.43□□□□□ -2.02
TRA1YHR099W YMR315WQ04869 349 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W GSH2Q08220 491 aa2.43□□□□□ -2.02
TRA1YHR099W APC11Q12157 165 aa2.43□□□□□ -2.02
TRA1YHR099W RPL7BQ12213 244 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W TIF6Q12522 245 aaKnown RBP2.43□□□□□ -2.02
TRA1YHR099W KRE5P22023 1365 aa2.42□□□□□ -2.02
TRA1YHR099W ULS1Q08562 1619 aa2.42□□□□□ -2.02
TRA1YHR099W TIF1P10081 395 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W BMH1P29311 267 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W PRS1P32895 427 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W CUE2P36075 443 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W DIA4P38705 446 aaPredicted RBP2.42□□□□□ -2.02
TRA1YHR099W TDA11P38854 504 aa2.42□□□□□ -2.02
TRA1YHR099W YJL206CP39529 758 aa2.42□□□□□ -2.02
TRA1YHR099W SAH1P39954 449 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W POL31P46957 487 aa2.42□□□□□ -2.02
TRA1YHR099W GIP3Q03016 1276 aa2.42□□□□□ -2.02
TRA1YHR099W AIM32Q04689 311 aa2.42□□□□□ -2.02
TRA1YHR099W GTO3Q04806 366 aa2.42□□□□□ -2.02
TRA1YHR099W FRQ1Q06389 190 aa2.42□□□□□ -2.02
TRA1YHR099W GRS2Q06817 618 aa2.42□□□□□ -2.02
TRA1YHR099W PEX27Q08580 376 aa2.42□□□□□ -2.02
TRA1YHR099W LAP2Q10740 671 aa2.42□□□□□ -2.02
TRA1YHR099W EAF3Q12432 401 aa2.42□□□□□ -2.02
TRA1YHR099W MSD1P15179 658 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W VAN1P23642 535 aa2.42□□□□□ -2.02
TRA1YHR099W PEX1P24004 1043 aa2.42□□□□□ -2.02
TRA1YHR099W GAC1P28006 793 aa2.42□□□□□ -2.02
TRA1YHR099W DAL1P32375 460 aa2.42□□□□□ -2.02
TRA1YHR099W PIN4P34217 668 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
TRA1YHR099W FRE2P36033 711 aa2.42□□□□□ -2.02
TRA1YHR099W STV1P37296 890 aa2.42□□□□□ -2.02
TRA1YHR099W RCK2P38623 610 aa2.42□□□□□ -2.02
TRA1YHR099W YEN1P40028 759 aa2.42□□□□□ -2.02
TRA1YHR099W ZPR1P53303 486 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W CRF1Q04930 467 aa2.42□□□□□ -2.02
TRA1YHR099W RTT109Q07794 436 aa2.42□□□□□ -2.02
TRA1YHR099W YGR161W-CQ3E744 92 aa2.42□□□□□ -2.02
TRA1YHR099W CDC15P27636 974 aa2.42□□□□□ -2.02
TRA1YHR099W YJR008WP47085 338 aa2.42□□□□□ -2.02
TRA1YHR099W FMP41P53889 259 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W ADA2Q02336 434 aa2.42□□□□□ -2.02
TRA1YHR099W YMR099CQ03161 297 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W NGL2Q03264 515 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W SFM1Q12314 213 aa2.42□□□□□ -2.02
TRA1YHR099W HEM2P05373 342 aa2.42□□□□□ -2.02
TRA1YHR099W RAD10P06838 210 aa2.42□□□□□ -2.02
TRA1YHR099W HVG1P0CE11 249 aa2.42□□□□□ -2.02
TRA1YHR099W STE4P18851 423 aa2.42□□□□□ -2.02
TRA1YHR099W HIR1P32479 840 aa2.42□□□□□ -2.02
TRA1YHR099W PET112P33893 541 aa2.42□□□□□ -2.02
TRA1YHR099W QNS1P38795 714 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W SDS3P40505 327 aa2.42□□□□□ -2.02
TRA1YHR099W VHR1P40522 640 aa2.42□□□□□ -2.02
TRA1YHR099W YGR210CP42942 411 aa2.42□□□□□ -2.02
TRA1YHR099W OSH6Q02201 448 aa2.42□□□□□ -2.02
TRA1YHR099W YPR127WQ06494 345 aa2.42□□□□□ -2.02
TRA1YHR099W LUC7Q07508 261 aaPredicted RBP2.42□□□□□ -2.02
TRA1YHR099W TPK1P06244 397 aa2.42□□□□□ -2.02
TRA1YHR099W TCP1P12612 559 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W PUT3P25502 979 aaPredicted RBP2.42□□□□□ -2.02
TRA1YHR099W MAL31P38156 614 aa2.42□□□□□ -2.02
TRA1YHR099W MSC7P38694 644 aa2.42□□□□□ -2.02
TRA1YHR099W RPS20P38701 121 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W ARN2P38724 620 aa2.42□□□□□ -2.02
TRA1YHR099W UBP12P39538 1254 aa2.42□□□□□ -2.02
TRA1YHR099W BUD16P39988 312 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms