RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YPR1Q12458 312 aa8.01□□□□□ -1.13
UFD1YGR048W FLO11P08640 1367 aa8□□□□□ -1.13
UFD1YGR048W CNB1P25296 175 aa8□□□□□ -1.13
UFD1YGR048W ADP1P25371 1049 aa8□□□□□ -1.13
UFD1YGR048W THI4P32318 326 aa8□□□□□ -1.13
UFD1YGR048W DBF4P32325 704 aa8□□□□□ -1.13
UFD1YGR048W ANP1P32629 500 aa8□□□□□ -1.13
UFD1YGR048W DUG2P38149 878 aa8□□□□□ -1.13
UFD1YGR048W YBR259WP38338 688 aa8□□□□□ -1.13
UFD1YGR048W OTU2P38747 307 aaKnown RBP8□□□□□ -1.13
UFD1YGR048W EDC3P39998 551 aaKnown RBP8□□□□□ -1.13
UFD1YGR048W FAR3P46671 204 aa8□□□□□ -1.13
UFD1YGR048W SAE2P46946 345 aa8□□□□□ -1.13
UFD1YGR048W COG1P53079 417 aa8□□□□□ -1.13
UFD1YGR048W FMP48P53233 369 aa8□□□□□ -1.13
UFD1YGR048W DAM1P53267 343 aa8□□□□□ -1.13
UFD1YGR048W RET3P53600 189 aa8□□□□□ -1.13
UFD1YGR048W YMR279CQ03263 540 aa8□□□□□ -1.13
UFD1YGR048W SCS7Q03529 384 aa8□□□□□ -1.13
UFD1YGR048W ADY4Q05955 493 aa8□□□□□ -1.13
UFD1YGR048W INP54Q08227 384 aaKnown RBP8□□□□□ -1.13
UFD1YGR048W YPR204WQ08995 1032 aa8□□□□□ -1.13
UFD1YGR048W SMF3Q12078 473 aaPredicted RBP8□□□□□ -1.13
UFD1YGR048W YOL107WQ12239 342 aa8□□□□□ -1.13
UFD1YGR048W BI2P03873 423 aa7.99□□□□□ -1.13
UFD1YGR048W GAL1P04385 528 aa7.99□□□□□ -1.13
UFD1YGR048W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
UFD1YGR048W SNF1P06782 633 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W RAD18P10862 487 aa7.99□□□□□ -1.13
UFD1YGR048W PHO81P17442 1178 aa7.99□□□□□ -1.13
UFD1YGR048W MAK31P23059 88 aa7.99□□□□□ -1.13
UFD1YGR048W MGT1P26188 188 aa7.99□□□□□ -1.13
UFD1YGR048W ITR1P30605 584 aa7.99□□□□□ -1.13
UFD1YGR048W RRN6P32786 894 aa7.99□□□□□ -1.13
UFD1YGR048W GEF1P37020 779 aa7.99□□□□□ -1.13
UFD1YGR048W CST26P38226 397 aa7.99□□□□□ -1.13
UFD1YGR048W SPL2P38839 148 aa7.99□□□□□ -1.13
UFD1YGR048W EGD2P38879 174 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W YHR202WP38887 602 aa7.99□□□□□ -1.13
UFD1YGR048W PLB1P39105 664 aa7.99□□□□□ -1.13
UFD1YGR048W AIM2P39721 246 aa7.99□□□□□ -1.13
UFD1YGR048W UTP7P40055 554 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W CSM2P40465 213 aa7.99□□□□□ -1.13
UFD1YGR048W GTT1P40582 234 aa7.99□□□□□ -1.13
UFD1YGR048W CHS6P40955 746 aa7.99□□□□□ -1.13
UFD1YGR048W CCT7P42943 550 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W MNN5P46982 586 aa7.99□□□□□ -1.13
UFD1YGR048W EFM3P47163 339 aa7.99□□□□□ -1.13
UFD1YGR048W CTR1P49573 406 aa7.99□□□□□ -1.13
UFD1YGR048W ACS1Q01574 713 aa7.99□□□□□ -1.13
UFD1YGR048W YPL068CQ02749 293 aa7.99□□□□□ -1.13
UFD1YGR048W RQC1Q05468 723 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W KAP95Q06142 861 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W FAL1Q12099 399 aaKnown RBP7.99□□□□□ -1.13
UFD1YGR048W RPP2BP02400 110 aaKnown RBP7.98□□□□□ -1.13
UFD1YGR048W HEM12P32347 362 aaPredicted RBP7.98□□□□□ -1.13
UFD1YGR048W PET309P32522 965 aaPredicted RBP7.98□□□□□ -1.13
UFD1YGR048W SRB2P34162 210 aa7.98□□□□□ -1.13
UFD1YGR048W MCM7P38132 845 aa7.98□□□□□ -1.13
UFD1YGR048W NCL1P38205 684 aaKnown RBP7.98□□□□□ -1.13
UFD1YGR048W CDS1P38221 457 aa7.98□□□□□ -1.13
UFD1YGR048W OSH7P38755 437 aa7.98□□□□□ -1.13
UFD1YGR048W YAT2P40017 923 aa7.98□□□□□ -1.13
UFD1YGR048W ASG1P40467 964 aa7.98□□□□□ -1.13
UFD1YGR048W HXT9P40885 567 aa7.98□□□□□ -1.13
UFD1YGR048W RTS2P40962 232 aa7.98□□□□□ -1.13
UFD1YGR048W ROK1P45818 564 aaPredicted RBP7.98□□□□□ -1.13
UFD1YGR048W ARC1P46672 376 aaKnown RBP7.98□□□□□ -1.13
UFD1YGR048W SLI1P53304 468 aa7.98□□□□□ -1.13
UFD1YGR048W RCF2P53721 224 aa7.98□□□□□ -1.13
UFD1YGR048W MUS81Q04149 632 aaPredicted RBP7.98□□□□□ -1.13
UFD1YGR048W ARP10Q04549 284 aa7.98□□□□□ -1.13
UFD1YGR048W RNH1Q04740 348 aa7.98□□□□□ -1.13
UFD1YGR048W YPS7Q06325 596 aa7.98□□□□□ -1.13
UFD1YGR048W HDA3Q06623 655 aa7.98□□□□□ -1.13
UFD1YGR048W YET3Q07451 203 aa7.98□□□□□ -1.13
UFD1YGR048W NBA1Q08229 501 aaKnown RBP7.98□□□□□ -1.13
UFD1YGR048W SSP2Q08646 371 aa7.98□□□□□ -1.13
UFD1YGR048W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
UFD1YGR048W PAB1P04147 577 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13 RIP-Chip
UFD1YGR048W CAP2P13517 287 aa7.97□□□□□ -1.13
UFD1YGR048W IDI1P15496 288 aa7.97□□□□□ -1.13
UFD1YGR048W NCP1P16603 691 aaKnown RBP7.97□□□□□ -1.13
UFD1YGR048W PRI2P20457 528 aa7.97□□□□□ -1.13
UFD1YGR048W GIT1P25346 518 aa7.97□□□□□ -1.13
UFD1YGR048W ATG22P25568 528 aa7.97□□□□□ -1.13
UFD1YGR048W SEC1P30619 724 aaKnown RBP7.97□□□□□ -1.13
UFD1YGR048W SPT14P32363 452 aa7.97□□□□□ -1.13
UFD1YGR048W MSS1P32559 526 aaPredicted RBP7.97□□□□□ -1.13
UFD1YGR048W TOM20P35180 183 aa7.97□□□□□ -1.13
UFD1YGR048W CBT1P36038 271 aaPredicted RBP7.97□□□□□ -1.13
UFD1YGR048W RIM2P38127 377 aa7.97□□□□□ -1.13
UFD1YGR048W SRP72P38688 640 aaKnown RBP7.97□□□□□ -1.13
UFD1YGR048W MSR1P38714 643 aa7.97□□□□□ -1.13
UFD1YGR048W ECM10P39987 644 aa7.97□□□□□ -1.13
UFD1YGR048W GID8P40208 455 aa7.97□□□□□ -1.13
UFD1YGR048W BST1P43571 1029 aa7.97□□□□□ -1.13
UFD1YGR048W GUF1P46943 645 aa7.97□□□□□ -1.13
UFD1YGR048W AIM23P47015 356 aa7.97□□□□□ -1.13
UFD1YGR048W IRC18P47056 224 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms