RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C COQ5P49017 307 aa3.9□□□□□ -1.79
OTU1YFL044C RNR4P49723 345 aaKnown RBP3.9□□□□□ -1.79
OTU1YFL044C DRN1P53255 507 aaKnown RBP3.9□□□□□ -1.79
OTU1YFL044C ASI2P53895 289 aa3.9□□□□□ -1.79
OTU1YFL044C MUS81Q04149 632 aaPredicted RBP3.9□□□□□ -1.79
OTU1YFL044C SPG3Q04398 127 aaPredicted RBP3.9□□□□□ -1.79
OTU1YFL044C TMA10Q06177 86 aa3.9□□□□□ -1.79
OTU1YFL044C YLR012CQ07927 99 aa3.9□□□□□ -1.79
OTU1YFL044C DIS3Q08162 1001 aaKnown RBP3.9□□□□□ -1.79
OTU1YFL044C RTK1Q12100 620 aaPredicted RBP3.9□□□□□ -1.79
OTU1YFL044C DDP1Q99321 188 aaKnown RBP3.9□□□□□ -1.79
OTU1YFL044C COX3P00420 269 aa3.89□□□□□ -1.79
OTU1YFL044C GLN4P13188 809 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C PHO81P17442 1178 aa3.89□□□□□ -1.79
OTU1YFL044C ARF2P19146 181 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C ERG6P25087 383 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C DAL2P25335 343 aa3.89□□□□□ -1.79
OTU1YFL044C SAC6P32599 642 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C BEM3P32873 1128 aa3.89□□□□□ -1.79
OTU1YFL044C LST4P34239 828 aa3.89□□□□□ -1.79
OTU1YFL044C THI80P35202 319 aa3.89□□□□□ -1.79
OTU1YFL044C MPE1P35728 441 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C SSZ1P38788 538 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C UBP7P40453 1071 aa3.89□□□□□ -1.79
OTU1YFL044C ASG1P40467 964 aa3.89□□□□□ -1.79
OTU1YFL044C AIP1P46680 615 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C YJR079WP47126 109 aa3.89□□□□□ -1.79
OTU1YFL044C YPT11P48559 417 aa3.89□□□□□ -1.79
OTU1YFL044C HOP2P53187 214 aa3.89□□□□□ -1.79
OTU1YFL044C ESBP6P53918 673 aa3.89□□□□□ -1.79
OTU1YFL044C MOT3P54785 490 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C GPD1Q00055 391 aaKnown RBP3.89□□□□□ -1.79
OTU1YFL044C ARO80Q04052 950 aa3.89□□□□□ -1.79
OTU1YFL044C ASM4Q05166 528 aa3.89□□□□□ -1.79
OTU1YFL044C ENT2Q05785 613 aa3.89□□□□□ -1.79
OTU1YFL044C OMS1Q06668 471 aa3.89□□□□□ -1.79
OTU1YFL044C SIL1Q08199 421 aa3.89□□□□□ -1.79
OTU1YFL044C YOL075CQ08234 1294 aa3.89□□□□□ -1.79
OTU1YFL044C CWC2Q12046 339 aaPredicted RBP3.89□□□□□ -1.79
OTU1YFL044C ARP7Q12406 477 aa3.89□□□□□ -1.79
OTU1YFL044C RAD3P06839 778 aa3.88□□□□□ -1.79
OTU1YFL044C TUB3P09734 445 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C GFD2P25370 566 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C KAR4P25583 335 aa3.88□□□□□ -1.79
OTU1YFL044C YIH1P25637 258 aa3.88□□□□□ -1.79
OTU1YFL044C CAP1P28495 268 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C PXL1P36166 706 aa3.88□□□□□ -1.79
OTU1YFL044C NPR3P38742 1146 aa3.88□□□□□ -1.79
OTU1YFL044C MIP6P38760 659 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C CIR1P42940 261 aa3.88□□□□□ -1.79
OTU1YFL044C BST1P43571 1029 aa3.88□□□□□ -1.79
OTU1YFL044C PHO86P46956 311 aa3.88□□□□□ -1.79
OTU1YFL044C ASG7P46993 209 aa3.88□□□□□ -1.79
OTU1YFL044C YJR039WP47107 1121 aa3.88□□□□□ -1.79
OTU1YFL044C ASK10P48361 1146 aa3.88□□□□□ -1.79
OTU1YFL044C PRP24P49960 444 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C MNN10P50108 393 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C HST1P53685 503 aa3.88□□□□□ -1.79
OTU1YFL044C CIA1Q05583 330 aa3.88□□□□□ -1.79
OTU1YFL044C YDL073WQ07454 984 aa3.88□□□□□ -1.79
OTU1YFL044C NGL1Q08213 363 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C CIR2Q08822 631 aa3.88□□□□□ -1.79
OTU1YFL044C SAM4Q08985 325 aaKnown RBP3.88□□□□□ -1.79
OTU1YFL044C NUR1Q12066 484 aa3.88□□□□□ -1.79
OTU1YFL044C PER33Q12144 273 aa3.88□□□□□ -1.79
OTU1YFL044C YOL087CQ99247 1116 aa3.88□□□□□ -1.79
OTU1YFL044C YLR415CO13578 112 aa3.87□□□□□ -1.79
OTU1YFL044C SEC63P14906 663 aa3.87□□□□□ -1.79
OTU1YFL044C HOP1P20050 605 aa3.87□□□□□ -1.79
OTU1YFL044C MSH1P25846 959 aa3.87□□□□□ -1.79
OTU1YFL044C PSO2P30620 661 aa3.87□□□□□ -1.79
OTU1YFL044C PXA2P34230 853 aa3.87□□□□□ -1.79
OTU1YFL044C PPE1P38796 400 aa3.87□□□□□ -1.79
OTU1YFL044C BEM4P39011 633 aa3.87□□□□□ -1.79
OTU1YFL044C MPT5P39016 859 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
OTU1YFL044C BDH2P39713 417 aa3.87□□□□□ -1.79
OTU1YFL044C ERV46P39727 415 aa3.87□□□□□ -1.79
OTU1YFL044C TIF34P40217 347 aaKnown RBP3.87□□□□□ -1.79
OTU1YFL044C IRC24P40580 263 aa3.87□□□□□ -1.79
OTU1YFL044C YPS6P40583 537 aa3.87□□□□□ -1.79
OTU1YFL044C PRP31P49704 494 aaPredicted RBP3.87□□□□□ -1.79
OTU1YFL044C EXG2P52911 562 aa3.87□□□□□ -1.79
OTU1YFL044C HOL1P53389 586 aa3.87□□□□□ -1.79
OTU1YFL044C TEP1P53916 434 aa3.87□□□□□ -1.79
OTU1YFL044C NOP15P53927 220 aaPredicted RBP3.87□□□□□ -1.79
OTU1YFL044C YAP7Q08182 245 aa3.87□□□□□ -1.79
OTU1YFL044C ENB1Q08299 606 aa3.87□□□□□ -1.79
OTU1YFL044C APL5Q08951 932 aaKnown RBP3.87□□□□□ -1.79
OTU1YFL044C AFT2Q08957 416 aa3.87□□□□□ -1.79
OTU1YFL044C GPR1Q12361 961 aa3.87□□□□□ -1.79
OTU1YFL044C GAL4P04386 881 aa3.86□□□□□ -1.79
OTU1YFL044C CDC33P07260 213 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C GPA1P08539 472 aa3.86□□□□□ -1.79
OTU1YFL044C MIS1P09440 975 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C CDC26P14724 124 aa3.86□□□□□ -1.79
OTU1YFL044C PUT4P15380 627 aa3.86□□□□□ -1.79
OTU1YFL044C EST1P17214 699 aaPredicted RBP3.86□□□□□ -1.79
OTU1YFL044C PRP4P20053 465 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C PMI40P29952 429 aaKnown RBP3.86□□□□□ -1.79
OTU1YFL044C MCM10P32354 571 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 302.9 ms