RNA–Protein interactions for RNA: YDR429C

TIF35, Transcript of eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene TIF35, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF35	YDR429C	MPE1	P35728	441 aa	Known RBP	2.76	□□□□□ -1.97
TIF35	YDR429C	PXL1	P36166	706 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	KTR3	P38130	404 aa	Predicted RBP	2.76	□□□□□ -1.97
TIF35	YDR429C	YBL029W	P38201	376 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	APD1	P38281	316 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	SEC31	P38968	1273 aa	Known RBP	2.76	□□□□□ -1.97
TIF35	YDR429C	ECM10	P39987	644 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	YFR020W	P43600	232 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	NMD5	P46970	1048 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	SGM1	P47166	707 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	DUO1	P53168	247 aa	Known RBP	2.76	□□□□□ -1.97
TIF35	YDR429C	RBG2	P53295	368 aa	Known RBP	2.76	□□□□□ -1.97
TIF35	YDR429C	NGL3	Q03210	505 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	RSM28	Q03430	361 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	GIR2	Q03768	265 aa	Predicted RBP	2.76	□□□□□ -1.97
TIF35	YDR429C	HUA2	Q12134	243 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	ATG9	Q12142	997 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	YBR126W-A	Q8TGU7	68 aa		2.76	□□□□□ -1.97
TIF35	YDR429C	YBR085C-A	O43137	85 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	URE2	P23202	354 aa	Known RBP	2.75	□□□□□ -1.97
TIF35	YDR429C	MNN2	P38069	597 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	YBR225W	P38321	900 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	MRX1	P40050	688 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	ASG1	P40467	964 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	LCL3	P53153	274 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	EAF7	P53911	425 aa	Known RBP	2.75	□□□□□ -1.97
TIF35	YDR429C	TDA9	Q04545	1251 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	SKG3	Q06315	1026 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	RCN2	Q12044	265 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	GET3	Q12154	354 aa	Known RBP	2.75	□□□□□ -1.97
TIF35	YDR429C	TAH18	Q12181	623 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	SPE4	Q12455	300 aa		2.75	□□□□□ -1.97
TIF35	YDR429C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.75	□□□□□ -1.97
TIF35	YDR429C	SEC7	P11075	2009 aa	Known RBP	2.75	□□□□□ -1.97
TIF35	YDR429C	RPO21	P04050	1733 aa	Known RBP	2.74	□□□□□ -1.97
TIF35	YDR429C	YCK1	P23291	538 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	OCA4	P25366	362 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	AGP2	P38090	596 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	MAL33	P38157	468 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	RTS1	P38903	757 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	VPS41	P38959	992 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	UIP3	P39547	235 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	ARF3	P40994	183 aa	RIP-Chip data	2.74	□□□□□ -1.97	not detected
TIF35	YDR429C	GAT1	P43574	510 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	RMD8	P43620	662 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	IRC7	P43623	340 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	RPS7B	P48164	190 aa	Known RBP	2.74	□□□□□ -1.97
TIF35	YDR429C	STR3	P53101	465 aa	Known RBP	2.74	□□□□□ -1.97
TIF35	YDR429C	YTP1	P53584	459 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	ARE2	P53629	642 aa	Known RBP	2.74	□□□□□ -1.97
TIF35	YDR429C	IST1	P53843	298 aa	Predicted RBP	2.74	□□□□□ -1.97
TIF35	YDR429C	VPS75	P53853	264 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	TIM10	P87108	93 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	TAF11	Q04226	346 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	SEG1	Q04279	960 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	PDR8	Q06149	701 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	YLR455W	Q06188	304 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	FRE3	Q08905	711 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	TCO89	Q08921	799 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	CTI6	Q08923	506 aa		2.74	□□□□□ -1.97
TIF35	YDR429C	ARO1	P08566	1588 aa	Known RBP	2.74	□□□□□ -1.97
TIF35	YDR429C	BUD3	P25558	1636 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	FOB1	O13329	566 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	ILS1	P09436	1072 aa	Known RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	KRS1	P15180	591 aa	Known RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	PWP1	P21304	576 aa	Known RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	STE50	P25344	346 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	YCR006C	P25350	157 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	PGS1	P25578	521 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	COQ3	P27680	312 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	ECM32	P32644	1121 aa	Known RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	SOF1	P33750	489 aa	Known RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	OCT1	P35999	772 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	LHS1	P36016	881 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	ARP1	P38696	384 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	DIA4	P38705	446 aa	Predicted RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	ARN1	P38731	627 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	NPR2	P39923	615 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	PKP1	P40530	394 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	YJL107C	P42947	387 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	CTK2	P46962	323 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	MRX6	P48564	524 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	ORC5	P50874	479 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	DSD1	P53095	428 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	MRPL19	P53875	158 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	IDP3	P53982	420 aa	Known RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	ASI1	P54074	624 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	MAK10	Q02197	733 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	PFA5	Q03289	374 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	RPC11	Q04307	110 aa	Predicted RBP	2.73	□□□□□ -1.97
TIF35	YDR429C	MFB1	Q04922	465 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	PIG1	Q06216	648 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	RTT109	Q07794	436 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	PSR1	Q07800	427 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	YPL272C	Q08984	517 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	SFI1	Q12369	946 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	GDB1	Q06625	1536 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	NTE1	Q04958	1679 aa		2.73	□□□□□ -1.97
TIF35	YDR429C	YPT1	P01123	206 aa	Known RBP	2.72	□□□□□ -1.97
TIF35	YDR429C	HXK2	P04807	486 aa	Known RBP	2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms