RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W ASE1P50275 885 aa3.32□□□□□ -1.88
SHE9YDR393W IST1P53843 298 aaPredicted RBP3.32□□□□□ -1.88
SHE9YDR393W CSR1Q06705 408 aaKnown RBP3.32□□□□□ -1.88
SHE9YDR393W ATG9Q12142 997 aa3.32□□□□□ -1.88
SHE9YDR393W AYT1Q12226 474 aa3.32□□□□□ -1.88
SHE9YDR393W PDH1Q12428 516 aaKnown RBP3.32□□□□□ -1.88
SHE9YDR393W MSS18P08593 268 aa3.31□□□□□ -1.88
SHE9YDR393W PGS1P25578 521 aa3.31□□□□□ -1.88
SHE9YDR393W HXT1P32465 570 aa3.31□□□□□ -1.88
SHE9YDR393W PTR2P32901 601 aa3.31□□□□□ -1.88
SHE9YDR393W TFC3P34111 1160 aa3.31□□□□□ -1.88
SHE9YDR393W UBA4P38820 440 aa3.31□□□□□ -1.88
SHE9YDR393W PTH1P38876 190 aaKnown RBP3.31□□□□□ -1.88
SHE9YDR393W YMR087WQ04299 284 aa3.31□□□□□ -1.88
SHE9YDR393W TMA16Q08687 178 aa3.31□□□□□ -1.88
SHE9YDR393W HEM2P05373 342 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-LR1P0C2J4 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-FP0CX61 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-GR2P0CX62 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-CP25383 438 aa3.3□□□□□ -1.88
SHE9YDR393W YEL045CP32616 141 aa3.3□□□□□ -1.88
SHE9YDR393W SIP2P34164 415 aaKnown RBP3.3□□□□□ -1.88
SHE9YDR393W ECM15P35195 104 aa3.3□□□□□ -1.88
SHE9YDR393W MTC4P38335 694 aaKnown RBP3.3□□□□□ -1.88
SHE9YDR393W TY2A-DR2Q03483 438 aa3.3□□□□□ -1.88
SHE9YDR393W THI20Q08224 551 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-BQ12260 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-OR2Q12293 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-DR1Q12392 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-OR1Q12439 438 aa3.3□□□□□ -1.88
SHE9YDR393W TY2A-DR3Q99303 438 aa3.3□□□□□ -1.88
SHE9YDR393W SNF3P10870 884 aa3.29□□□□□ -1.88
SHE9YDR393W SAM50P53969 484 aa3.29□□□□□ -1.88
SHE9YDR393W GRC3Q07845 632 aa3.29□□□□□ -1.88
SHE9YDR393W YCL021W-AQ96VH3 125 aa3.29□□□□□ -1.88
SHE9YDR393W SEC62P21825 274 aa3.28□□□□□ -1.88
SHE9YDR393W YKL133CP36066 463 aa3.28□□□□□ -1.88
SHE9YDR393W SMC3P47037 1230 aa3.28□□□□□ -1.88
SHE9YDR393W YGL082WP53155 381 aa3.28□□□□□ -1.88
SHE9YDR393W DIC1Q06143 298 aa3.28□□□□□ -1.88
SHE9YDR393W HXK2P04807 486 aaKnown RBP3.27□□□□□ -1.89
SHE9YDR393W RPL20AP0CX23 172 aaKnown RBP3.27□□□□□ -1.89
SHE9YDR393W RPL20BP0CX24 172 aaPredicted RBP3.27□□□□□ -1.89
SHE9YDR393W CMK1P27466 446 aaKnown RBP3.27□□□□□ -1.89
SHE9YDR393W SNC1P31109 117 aa3.27□□□□□ -1.89
SHE9YDR393W VPS17P32913 551 aa3.27□□□□□ -1.89
SHE9YDR393W SMK1P41808 388 aa3.27□□□□□ -1.89
SHE9YDR393W COG1P53079 417 aa3.27□□□□□ -1.89
SHE9YDR393W SSK1Q07084 712 aa3.27□□□□□ -1.89
SHE9YDR393W COX17Q12287 69 aa3.27□□□□□ -1.89
SHE9YDR393W NCP1P16603 691 aaKnown RBP3.26□□□□□ -1.89
SHE9YDR393W LCB1P25045 558 aaKnown RBP3.26□□□□□ -1.89
SHE9YDR393W YNK1P36010 153 aaKnown RBP3.26□□□□□ -1.89
SHE9YDR393W ANS1P38832 159 aa3.26□□□□□ -1.89
SHE9YDR393W STR3P53101 465 aaKnown RBP3.26□□□□□ -1.89
SHE9YDR393W APJ1P53940 528 aa3.26□□□□□ -1.89
SHE9YDR393W MLC2Q06580 163 aa3.26□□□□□ -1.89
SHE9YDR393W APL4Q12028 832 aa3.26□□□□□ -1.89
SHE9YDR393W PCD1Q12524 340 aa3.26□□□□□ -1.89
SHE9YDR393W PMR1P13586 950 aa3.25□□□□□ -1.89
SHE9YDR393W HIS6P40545 261 aa3.25□□□□□ -1.89
SHE9YDR393W DPB11P47027 764 aaPredicted RBP3.25□□□□□ -1.89
SHE9YDR393W YNR061CP53747 219 aa3.25□□□□□ -1.89
SHE9YDR393W ZDS2P54786 942 aa3.25□□□□□ -1.89
SHE9YDR393W VPS27P40343 622 aaKnown RBP3.25□□□□□ -1.89
SHE9YDR393W FAF1P40546 346 aaPredicted RBP3.25□□□□□ -1.89
SHE9YDR393W MET14Q02196 202 aa3.25□□□□□ -1.89
SHE9YDR393W HEL2Q05580 639 aaKnown RBP3.25□□□□□ -1.89
SHE9YDR393W SOD1P00445 154 aaKnown RBP3.24□□□□□ -1.89
SHE9YDR393W SAC6P32599 642 aaKnown RBP3.24□□□□□ -1.89
SHE9YDR393W YKL050CP35736 922 aa3.24□□□□□ -1.89
SHE9YDR393W TAN1P53072 289 aaPredicted RBP3.24□□□□□ -1.89
SHE9YDR393W INP53Q12271 1107 aa3.24□□□□□ -1.89
SHE9YDR393W VCX1Q99385 411 aa3.24□□□□□ -1.89
SHE9YDR393W GAL1P04385 528 aa3.23□□□□□ -1.89
SHE9YDR393W SNU114P36048 1008 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W SRO77P38163 1010 aa3.23□□□□□ -1.89
SHE9YDR393W RFS1P38234 210 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W NPR3P38742 1146 aa3.23□□□□□ -1.89
SHE9YDR393W VPS52P39904 641 aa3.23□□□□□ -1.89
SHE9YDR393W PFK26P40433 827 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W RPS10BP46784 105 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W PYK2P52489 506 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W YVH1Q02256 364 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W PAL1Q05518 499 aaKnown RBP3.23□□□□□ -1.89
SHE9YDR393W TMC1Q08422 150 aaPredicted RBP3.23□□□□□ -1.89
SHE9YDR393W SSB1P11484 613 aaKnown RBP3.22□□□□□ -1.89
SHE9YDR393W RER1P25560 188 aa3.22□□□□□ -1.89
SHE9YDR393W CDC15P27636 974 aa3.22□□□□□ -1.89
SHE9YDR393W LAG1P38703 411 aa3.22□□□□□ -1.89
SHE9YDR393W SSB2P40150 613 aaKnown RBP3.22□□□□□ -1.89
SHE9YDR393W PEX8P53248 589 aa3.22□□□□□ -1.89
SHE9YDR393W WSC2P53832 503 aa3.22□□□□□ -1.89
SHE9YDR393W YER078W-AQ3E7A2 54 aa3.22□□□□□ -1.89
SHE9YDR393W YOR019WQ99248 730 aa3.22□□□□□ -1.89
SHE9YDR393W TPK1P06244 397 aa3.21□□□□□ -1.9
SHE9YDR393W PMU1P36069 295 aa3.21□□□□□ -1.9
SHE9YDR393W TUL1P36096 758 aa3.21□□□□□ -1.9
SHE9YDR393W ROT2P38138 954 aa3.21□□□□□ -1.9
SHE9YDR393W SDT1P53078 280 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms