RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C YGR127WP53275 312 aa5.12□□□□□ -1.59
LSM6YDR378C MAK10Q02197 733 aa5.12□□□□□ -1.59
LSM6YDR378C EMI2Q04409 500 aaKnown RBP5.12□□□□□ -1.59
LSM6YDR378C ARP10Q04549 284 aa5.12□□□□□ -1.59
LSM6YDR378C MCP2Q06567 569 aa5.12□□□□□ -1.59
LSM6YDR378C YOL159CQ08300 171 aa5.12□□□□□ -1.59
LSM6YDR378C YER190C-BP0CX94 160 aa5.11□□□□□ -1.59
LSM6YDR378C YEL077W-AP0CX95 160 aa5.11□□□□□ -1.59
LSM6YDR378C YGR296C-BP0CX96 160 aa5.11□□□□□ -1.59
LSM6YDR378C YPL283W-BP0CX97 160 aa5.11□□□□□ -1.59
LSM6YDR378C YPR204C-AP0CX98 160 aa5.11□□□□□ -1.59
LSM6YDR378C ECM32P32644 1121 aaKnown RBP5.11□□□□□ -1.59
LSM6YDR378C MIA40P36046 403 aa5.11□□□□□ -1.59
LSM6YDR378C YBR225WP38321 900 aa5.11□□□□□ -1.59
LSM6YDR378C SPC97P38863 823 aa5.11□□□□□ -1.59
LSM6YDR378C FAR3P46671 204 aa5.11□□□□□ -1.59
LSM6YDR378C SGM1P47166 707 aa5.11□□□□□ -1.59
LSM6YDR378C CAC2Q04199 468 aa5.11□□□□□ -1.59
LSM6YDR378C DPB4Q04603 196 aaKnown RBP5.11□□□□□ -1.59
LSM6YDR378C UTP21Q06078 939 aaPredicted RBP5.11□□□□□ -1.59
LSM6YDR378C LUC7Q07508 261 aaPredicted RBP5.11□□□□□ -1.59
LSM6YDR378C YLR112WQ12130 139 aa5.11□□□□□ -1.59
LSM6YDR378C HER1Q12276 1246 aa5.11□□□□□ -1.59
LSM6YDR378C SPE4Q12455 300 aa5.11□□□□□ -1.59
LSM6YDR378C MF(ALPHA)1P01149 165 aa5.1□□□□□ -1.59
LSM6YDR378C MET8P15807 274 aa5.1□□□□□ -1.59
LSM6YDR378C MGM1P32266 881 aa5.1□□□□□ -1.59
LSM6YDR378C REG2P38232 338 aa5.1□□□□□ -1.59
LSM6YDR378C TSC10P38342 320 aa5.1□□□□□ -1.59
LSM6YDR378C DBP8P38719 431 aa5.1□□□□□ -1.59
LSM6YDR378C PCI8P40512 444 aa5.1□□□□□ -1.59
LSM6YDR378C MRX6P48564 524 aa5.1□□□□□ -1.59
LSM6YDR378C SGF73P53165 657 aa5.1□□□□□ -1.59
LSM6YDR378C EFM6P53970 246 aa5.1□□□□□ -1.59
LSM6YDR378C MDM1Q01846 1127 aa5.1□□□□□ -1.59
LSM6YDR378C RPT6Q01939 405 aaKnown RBP5.1□□□□□ -1.59
LSM6YDR378C YEH1Q07804 573 aa5.1□□□□□ -1.59
LSM6YDR378C GSH2Q08220 491 aa5.1□□□□□ -1.59
LSM6YDR378C SDH5Q08230 162 aa5.1□□□□□ -1.59
LSM6YDR378C FMP40Q08968 688 aaPredicted RBP5.1□□□□□ -1.59
LSM6YDR378C ARG81P05085 880 aa5.09□□□□□ -1.59
LSM6YDR378C CBS1P14066 229 aa5.09□□□□□ -1.59
LSM6YDR378C AIM17P23180 465 aaKnown RBP5.09□□□□□ -1.59
LSM6YDR378C SSE2P32590 693 aaKnown RBP5.09□□□□□ -1.59
LSM6YDR378C ICS2P38284 255 aa5.09□□□□□ -1.59
LSM6YDR378C ANS1P38832 159 aa5.09□□□□□ -1.59
LSM6YDR378C RGI2P40188 164 aa5.09□□□□□ -1.59
LSM6YDR378C YIR016WP40572 265 aa5.09□□□□□ -1.59
LSM6YDR378C RMD8P43620 662 aa5.09□□□□□ -1.59
LSM6YDR378C LYS20P48570 428 aaKnown RBP5.09□□□□□ -1.59
LSM6YDR378C ERG26P53199 349 aaKnown RBP5.09□□□□□ -1.59
LSM6YDR378C VPS75P53853 264 aa5.09□□□□□ -1.59
LSM6YDR378C YNL234WP53857 426 aa5.09□□□□□ -1.59
LSM6YDR378C RPL15BP54780 204 aaPredicted RBP5.09□□□□□ -1.59
LSM6YDR378C ECI1Q05871 280 aa5.09□□□□□ -1.59
LSM6YDR378C ECM30Q06673 1274 aa5.09□□□□□ -1.59
LSM6YDR378C TEN1Q07921 160 aa5.09□□□□□ -1.59
LSM6YDR378C ETT1Q08421 412 aaKnown RBP5.09□□□□□ -1.59
LSM6YDR378C YPL272CQ08984 517 aa5.09□□□□□ -1.59
LSM6YDR378C TAH18Q12181 623 aa5.09□□□□□ -1.59
LSM6YDR378C CBP1P07252 654 aa5.08□□□□□ -1.6
LSM6YDR378C GAC1P28006 793 aa5.08□□□□□ -1.6
LSM6YDR378C YBR144CP34215 104 aa5.08□□□□□ -1.6
LSM6YDR378C JNM1P36224 373 aa5.08□□□□□ -1.6
LSM6YDR378C ESL1P40456 1118 aa5.08□□□□□ -1.6
LSM6YDR378C ARF3P40994 183 aaRIP-Chip data5.08□□□□□ -1.6not detected
LSM6YDR378C MDV1P47025 714 aa5.08□□□□□ -1.6
LSM6YDR378C VID30P53076 958 aa5.08□□□□□ -1.6
LSM6YDR378C YGR066CP53242 292 aa5.08□□□□□ -1.6
LSM6YDR378C ARE2P53629 642 aaKnown RBP5.08□□□□□ -1.6
LSM6YDR378C CTL1Q03220 320 aaKnown RBP5.08□□□□□ -1.6
LSM6YDR378C MFB1Q04922 465 aa5.08□□□□□ -1.6
LSM6YDR378C ATG26Q06321 1198 aa5.08□□□□□ -1.6
LSM6YDR378C GRC3Q07845 632 aa5.08□□□□□ -1.6
LSM6YDR378C CIR2Q08822 631 aa5.08□□□□□ -1.6
LSM6YDR378C AFT2Q08957 416 aa5.08□□□□□ -1.6
LSM6YDR378C YJR112W-AQ3E743 109 aa5.08□□□□□ -1.6
LSM6YDR378C YPT6Q99260 215 aa5.08□□□□□ -1.6
LSM6YDR378C PGS1P25578 521 aa5.07□□□□□ -1.6
LSM6YDR378C IMG1P25626 169 aa5.07□□□□□ -1.6
LSM6YDR378C UBP11P36026 717 aa5.07□□□□□ -1.6
LSM6YDR378C NPR2P39923 615 aa5.07□□□□□ -1.6
LSM6YDR378C TDA9Q04545 1251 aa5.07□□□□□ -1.6
LSM6YDR378C EST1P17214 699 aaPredicted RBP5.06□□□□□ -1.6
LSM6YDR378C KGD1P20967 1014 aaKnown RBP5.06□□□□□ -1.6
LSM6YDR378C OCA4P25366 362 aa5.06□□□□□ -1.6
LSM6YDR378C BOS1P25385 244 aa5.06□□□□□ -1.6
LSM6YDR378C PUP3P25451 205 aaKnown RBP5.06□□□□□ -1.6
LSM6YDR378C YIL060WP40519 144 aa5.06□□□□□ -1.6
LSM6YDR378C HXT9P40885 567 aa5.06□□□□□ -1.6
LSM6YDR378C SCW4P53334 386 aaKnown RBP5.06□□□□□ -1.6
LSM6YDR378C IZH1Q03419 316 aa5.06□□□□□ -1.6
LSM6YDR378C YDL218WQ07629 317 aa5.06□□□□□ -1.6
LSM6YDR378C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
LSM6YDR378C UBX3Q12229 455 aa5.06□□□□□ -1.6
LSM6YDR378C EDE1P34216 1381 aa5.05□□□□□ -1.6
LSM6YDR378C SEF1P34228 1148 aa5.05□□□□□ -1.6
LSM6YDR378C ASK1P35734 292 aa5.05□□□□□ -1.6
LSM6YDR378C ALG5P40350 334 aa5.05□□□□□ -1.6
LSM6YDR378C BOP3P53958 396 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms