RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YAT1P80235 687 aa2.14□□□□□ -2.07
SIR4YDR227W YLR297WQ05899 129 aa2.14□□□□□ -2.07
SIR4YDR227W BNA5Q05979 453 aa2.14□□□□□ -2.07
SIR4YDR227W SYT1Q06836 1226 aa2.14□□□□□ -2.07
SIR4YDR227W AAD4Q07747 329 aa2.14□□□□□ -2.07
SIR4YDR227W SLK19Q08581 821 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W TRM8Q12009 286 aa2.14□□□□□ -2.07
SIR4YDR227W TAF10Q12030 206 aa2.14□□□□□ -2.07
SIR4YDR227W ERG27Q12452 347 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W ATG11Q12527 1178 aa2.14□□□□□ -2.07
SIR4YDR227W GPH1P06738 902 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W HAP2P06774 265 aa2.14□□□□□ -2.07
SIR4YDR227W MATALPHA2P0CY08 210 aa2.14□□□□□ -2.07
SIR4YDR227W HMLALPHA2P0CY09 210 aa2.14□□□□□ -2.07
SIR4YDR227W KAR3P17119 729 aa2.14□□□□□ -2.07
SIR4YDR227W IDH2P28241 369 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W RML2P32611 393 aa2.14□□□□□ -2.07
SIR4YDR227W REC104P33323 182 aa2.14□□□□□ -2.07
SIR4YDR227W SEF1P34228 1148 aa2.14□□□□□ -2.07
SIR4YDR227W IMA5P40884 581 aa2.14□□□□□ -2.07
SIR4YDR227W EMW1P42842 904 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W SMC3P47037 1230 aa2.14□□□□□ -2.07
SIR4YDR227W YGR111WP53265 400 aa2.14□□□□□ -2.07
SIR4YDR227W TOF2Q02208 771 aa2.14□□□□□ -2.07
SIR4YDR227W BSC6Q08280 497 aa2.14□□□□□ -2.07
SIR4YDR227W FRE7Q12333 620 aa2.14□□□□□ -2.07
SIR4YDR227W SFI1Q12369 946 aa2.14□□□□□ -2.07
SIR4YDR227W ERP3Q12403 225 aa2.14□□□□□ -2.07
SIR4YDR227W SET6Q12529 373 aa2.14□□□□□ -2.07
SIR4YDR227W YIL002W-AQ3E7Z5 69 aa2.14□□□□□ -2.07
SIR4YDR227W TDH1P00360 332 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W YCK1P23291 538 aa2.14□□□□□ -2.07
SIR4YDR227W SGV1P23293 657 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W YCR016WP25617 290 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W BCS1P32839 456 aa2.14□□□□□ -2.07
SIR4YDR227W YHR182WP38870 785 aa2.14□□□□□ -2.07
SIR4YDR227W AKR1P39010 764 aa2.14□□□□□ -2.07
SIR4YDR227W HIT1P46973 164 aa2.14□□□□□ -2.07
SIR4YDR227W NIT2P47016 307 aa2.14□□□□□ -2.07
SIR4YDR227W NPA3P47122 385 aa2.14□□□□□ -2.07
SIR4YDR227W YPT11P48559 417 aa2.14□□□□□ -2.07
SIR4YDR227W YGL036WP53185 909 aaPredicted RBP2.14□□□□□ -2.07
SIR4YDR227W YAP1802P53309 568 aa2.14□□□□□ -2.07
SIR4YDR227W ACS1Q01574 713 aa2.14□□□□□ -2.07
SIR4YDR227W BUD22Q04347 519 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W RAS1P01119 309 aa2.13□□□□□ -2.07
SIR4YDR227W MTF2P10849 440 aa2.13□□□□□ -2.07
SIR4YDR227W PYC1P11154 1178 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W CDC24P11433 854 aaPredicted RBP2.13□□□□□ -2.07
SIR4YDR227W RAP1P11938 827 aa2.13□□□□□ -2.07
SIR4YDR227W MSS51P32335 436 aa2.13□□□□□ -2.07
SIR4YDR227W RPC82P32349 654 aa2.13□□□□□ -2.07
SIR4YDR227W NIP1P32497 812 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W ARC19P33204 171 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W TAF14P35189 244 aa2.13□□□□□ -2.07
SIR4YDR227W FAT1P38225 669 aa2.13□□□□□ -2.07
SIR4YDR227W BFR1P38934 470 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SIR4YDR227W UBP5P39944 805 aa2.13□□□□□ -2.07
SIR4YDR227W YIR007WP40566 764 aa2.13□□□□□ -2.07
SIR4YDR227W VTC4P47075 721 aa2.13□□□□□ -2.07
SIR4YDR227W NUT1P53114 1132 aa2.13□□□□□ -2.07
SIR4YDR227W PNC1P53184 216 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W PRM1P53835 661 aa2.13□□□□□ -2.07
SIR4YDR227W YNL146WP53906 100 aa2.13□□□□□ -2.07
SIR4YDR227W ARR1Q06596 294 aa2.13□□□□□ -2.07
SIR4YDR227W RXT3Q07458 294 aa2.13□□□□□ -2.07
SIR4YDR227W GRE1Q08969 168 aa2.13□□□□□ -2.07
SIR4YDR227W SAM4Q08985 325 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W RCN2Q12044 265 aa2.13□□□□□ -2.07
SIR4YDR227W PDR18P53756 1333 aa2.13□□□□□ -2.07
SIR4YDR227W ATP12P22135 325 aa2.13□□□□□ -2.07
SIR4YDR227W CMK2P22517 447 aa2.13□□□□□ -2.07
SIR4YDR227W ATG15P25641 520 aa2.13□□□□□ -2.07
SIR4YDR227W REV7P38927 245 aa2.13□□□□□ -2.07
SIR4YDR227W RVS167P39743 482 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W PUG1P40100 303 aa2.13□□□□□ -2.07
SIR4YDR227W YIL108WP40483 696 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W AIR1P40507 360 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W SPO22P40511 975 aa2.13□□□□□ -2.07
SIR4YDR227W SNL1P40548 159 aa2.13□□□□□ -2.07
SIR4YDR227W OPT1P40897 799 aa2.13□□□□□ -2.07
SIR4YDR227W HXT10P43581 546 aa2.13□□□□□ -2.07
SIR4YDR227W MTR3P48240 250 aaPredicted RBP2.13□□□□□ -2.07
SIR4YDR227W YGR053CP53234 283 aa2.13□□□□□ -2.07
SIR4YDR227W ECM9Q02202 377 aa2.13□□□□□ -2.07
SIR4YDR227W INA17Q02888 182 aa2.13□□□□□ -2.07
SIR4YDR227W NGL3Q03210 505 aa2.13□□□□□ -2.07
SIR4YDR227W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SIR4YDR227W RAD7P06779 565 aa2.13□□□□□ -2.07
SIR4YDR227W FUM1P08417 488 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W MTF1P14908 341 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W PRO1P32264 428 aa2.13□□□□□ -2.07
SIR4YDR227W PYC2P32327 1180 aaKnown RBP2.13□□□□□ -2.07
SIR4YDR227W HOG1P32485 435 aa2.13□□□□□ -2.07
SIR4YDR227W GYP6P32806 458 aa2.13□□□□□ -2.07
SIR4YDR227W YKR051WP36142 418 aa2.13□□□□□ -2.07
SIR4YDR227W STV1P37296 890 aa2.13□□□□□ -2.07
SIR4YDR227W HMT1P38074 348 aa2.13□□□□□ -2.07
SIR4YDR227W PPS1P38148 807 aa2.13□□□□□ -2.07
SIR4YDR227W SIP3P38717 1229 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms