RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene SHU2, Length 672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHU2	YDR078C	BOP3	P53958	396 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	DPB4	Q04603	196 aa	Known RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	RTT109	Q07794	436 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	YOL159C	Q08300	171 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	SLK19	Q08581	821 aa	Known RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	LEU9	Q12166	604 aa	Known RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	SNU66	Q12420	587 aa	Predicted RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	CHO1	P08456	276 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	HOM3	P10869	527 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	KGD1	P20967	1014 aa	Known RBP	4.18	□□□□□ -1.74
SHU2	YDR078C	STE50	P25344	346 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	PUP3	P25451	205 aa	Known RBP	4.18	□□□□□ -1.74
SHU2	YDR078C	GPI10	P30777	616 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	SYN8	P31377	255 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	TIF3	P34167	436 aa	Known RBP	4.18	□□□□□ -1.74
SHU2	YDR078C	PXA2	P34230	853 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	MAF1	P41910	395 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	TAX4	P47030	604 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	ORC5	P50874	479 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	YDR131C	Q03899	556 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	MRD1	Q06106	887 aa	Known RBP	4.18	□□□□□ -1.74
SHU2	YDR078C	APL4	Q12028	832 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	YLR049C	Q12110	428 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	YLR111W	Q12528	110 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	YOL159C-A	Q3E769	90 aa		4.18	□□□□□ -1.74
SHU2	YDR078C	GAL80	P04387	435 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	GPA1	P08539	472 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	RAP1	P11938	827 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	KRS1	P15180	591 aa	Known RBP	4.17	□□□□□ -1.74
SHU2	YDR078C	SPE2	P21182	396 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	IMG1	P25626	169 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	DBF4	P32325	704 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	WBP1	P33767	430 aa	Known RBP	4.17	□□□□□ -1.74
SHU2	YDR078C	YBR144C	P34215	104 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	OCT1	P35999	772 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	HOT13	P36078	116 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	NUP133	P36161	1157 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	ALG5	P40350	334 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	PET130	P47065	347 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	IMD4	P50094	524 aa	Known RBP	4.17	□□□□□ -1.74
SHU2	YDR078C	YML6	P51998	286 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	NNF2	P53253	936 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	YMR178W	Q03219	274 aa	Known RBP	4.17	□□□□□ -1.74
SHU2	YDR078C	PFA5	Q03289	374 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	FIN1	Q03898	291 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	ETT1	Q08421	412 aa	Known RBP	4.17	□□□□□ -1.74
SHU2	YDR078C	ATG29	Q12092	213 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	RLM1	Q12224	676 aa		4.17	□□□□□ -1.74
SHU2	YDR078C	SGS1	P35187	1447 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	ILS1	P09436	1072 aa	Known RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	MRP13	P12686	339 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	PDA1	P16387	420 aa	Known RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	CLB3	P24870	427 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	YCR006C	P25350	157 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	SAC1	P32368	623 aa	Known RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	MRE11	P32829	692 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	TSC10	P38342	320 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	SRP72	P38688	640 aa	Known RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	BPL1	P48445	690 aa	Predicted RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	HOS2	P53096	452 aa	Predicted RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	TWF1	P53250	332 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	YDR239C	Q03780	787 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	SNU56	Q03782	492 aa	Known RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	RPC11	Q04307	110 aa	Predicted RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	RQC1	Q05468	723 aa	Known RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	ECM22	Q05958	814 aa	Predicted RBP	4.16	□□□□□ -1.74
SHU2	YDR078C	PDR8	Q06149	701 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	TEN1	Q07921	160 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	MCH4	Q08268	501 aa		4.16	□□□□□ -1.74
SHU2	YDR078C	YER145C-A	A0A023PYF4	145 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	ART10	P18634	518 aa	Known RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	TKL1	P23254	680 aa	Known RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	CLB2	P24869	491 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	PRD1	P25375	712 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	ILV6	P25605	309 aa	Known RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	SEC66	P33754	206 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	SAS3	P34218	831 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	YBL055C	P34220	418 aa	Predicted RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	PEX5	P35056	612 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	BLI1	P35727	113 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	CMC1	P36064	111 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	PXL1	P36166	706 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	ARN1	P38731	627 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	OTU2	P38747	307 aa	Known RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	ERG26	P53199	349 aa	Known RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	YTP1	P53584	459 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	IPI3	P53877	555 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	EAF7	P53911	425 aa	Known RBP	4.15	□□□□□ -1.75
SHU2	YDR078C	PIG1	Q06216	648 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	TPO3	Q06451	622 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	GRC3	Q07845	632 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	SEC39	Q12745	709 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	SMC6	Q12749	1114 aa		4.15	□□□□□ -1.75
SHU2	YDR078C	APN1	P22936	367 aa		4.14	□□□□□ -1.75
SHU2	YDR078C	BUD5	P25300	642 aa	Predicted RBP	4.14	□□□□□ -1.75
SHU2	YDR078C	BOS1	P25385	244 aa		4.14	□□□□□ -1.75
SHU2	YDR078C	ADK2	P26364	225 aa		4.14	□□□□□ -1.75
SHU2	YDR078C	PPZ2	P33329	710 aa		4.14	□□□□□ -1.75
SHU2	YDR078C	ICS2	P38284	255 aa		4.14	□□□□□ -1.75
SHU2	YDR078C	DBP8	P38719	431 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms