RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	SCH9	P11792	824 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	INO1	P11986	533 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	ILV6	P25605	309 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	YCR099C	P25657	155 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	SMI1	P32566	505 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	YME1	P32795	747 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	RRN3	P36070	627 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	YBR032W	P38223	100 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	MED8	P38304	223 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	SPC97	P38863	823 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	EXO1	P39875	702 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	HOS4	P40480	1083 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	DPH1	P40487	425 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	FAA4	P47912	694 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	TIS11	P47977	285 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	RTA1	P53047	317 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	YGL140C	P53120	1219 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	MON1	P53129	644 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	BUD32	P53323	261 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	KTR5	P53966	522 aa	Predicted RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	RPL22B	P56628	122 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	CDC14	Q00684	551 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
HSP30	YCR021C	SHR3	Q02774	210 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	YSH1	Q06224	779 aa	Predicted RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	OMS1	Q06668	471 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	TRE2	Q08693	809 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	YLR053C	Q12026	108 aa		4.05	□□□□□ -1.76
HSP30	YCR021C	MRH1	Q12117	320 aa	Predicted RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	RIB2	Q12362	591 aa	Known RBP	4.05	□□□□□ -1.76
HSP30	YCR021C	STE2	D6VTK4	431 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	MIS1	P09440	975 aa	Known RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	RNA1	P11745	407 aa	Known RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	SRV2	P17555	526 aa	Known RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	MIH1	P23748	554 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	AAD3	P25612	363 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	HEM3	P28789	327 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	AEP1	P32493	518 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	RML2	P32611	393 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	STE13	P33894	931 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	RPC37	P36121	282 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	PHO89	P38361	574 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	YJL206C	P39529	758 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	VAC8	P39968	578 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	PEP8	P40335	379 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	IST3	P40565	148 aa	Predicted RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	YJL107C	P42947	387 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	BFA1	P47113	574 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	ECL1	P48235	211 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	PYK2	P52489	506 aa	Known RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	NBP35	P52920	328 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	IPI3	P53877	555 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	YNL143C	P53908	130 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	RLI1	Q03195	608 aa	Known RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	CSN9	Q03981	162 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	TRM12	Q04235	462 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	CDC123	Q05791	360 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	TDA5	Q06417	326 aa	Known RBP	4.04	□□□□□ -1.76
HSP30	YCR021C	LDB18	Q07887	179 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	UBX3	Q12229	455 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	NSI1	Q12457	570 aa		4.04	□□□□□ -1.76
HSP30	YCR021C	RAD3	P06839	778 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	SEC53	P07283	254 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	RPS4A	P0CX35	261 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	RPS4B	P0CX36	261 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	PMA2	P19657	947 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	YSP3	P25036	478 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	YCR051W	P25631	222 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	MSH2	P25847	964 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	HEM12	P32347	362 aa	Predicted RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	IMP3	P32899	183 aa	Predicted RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	LRG1	P35688	1017 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	MRP21	P38175	177 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	FUI1	P38196	639 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	GDT1	P38301	280 aa	Predicted RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	YBR259W	P38338	688 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	TAE1	P38340	232 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	ARP1	P38696	384 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	GIP4	P39732	760 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	RGI2	P40188	164 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	DSN1	P40568	576 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	VMA13	P41807	478 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	PXA1	P41909	870 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	BUD13	P46947	266 aa	Predicted RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	GLG2	P47011	380 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	COG7	P53195	279 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	ORC3	P54790	616 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	AAT1	Q01802	451 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	SMA1	Q02651	245 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	YMR102C	Q03177	834 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	FAR8	Q05040	523 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	HEL2	Q05580	639 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	YPR114W	Q06107	315 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	NUS1	Q12063	375 aa		4.03	□□□□□ -1.76
HSP30	YCR021C	CHS5	Q12114	671 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	RUD3	Q12234	484 aa	Known RBP	4.03	□□□□□ -1.76
HSP30	YCR021C	PHO5	P00635	467 aa		4.02	□□□□□ -1.77
HSP30	YCR021C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.02	□□□□□ -1.77
HSP30	YCR021C	TY1A-DR6	P0CX70	440 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms