RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C ASG1P40467 964 aa2.88□□□□□ -1.95
RIF1YBR275C CTK2P46962 323 aa2.88□□□□□ -1.95
RIF1YBR275C DPB11P47027 764 aaPredicted RBP2.88□□□□□ -1.95
RIF1YBR275C CCT8P47079 568 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C TAN1P53072 289 aaPredicted RBP2.88□□□□□ -1.95
RIF1YBR275C MHR1Q06630 226 aa2.88□□□□□ -1.95
RIF1YBR275C YLR122CQ12312 125 aa2.88□□□□□ -1.95
RIF1YBR275C GTT2Q12390 233 aa2.88□□□□□ -1.95
RIF1YBR275C RTN2Q12443 393 aa2.88□□□□□ -1.95
RIF1YBR275C YPT1P01123 206 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C HMG1P12683 1054 aa2.88□□□□□ -1.95
RIF1YBR275C ACP1P32463 125 aa2.88□□□□□ -1.95
RIF1YBR275C PAN5P38787 379 aa2.88□□□□□ -1.95
RIF1YBR275C FET3P38993 636 aa2.88□□□□□ -1.95
RIF1YBR275C VMA10P48836 114 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C SKP1P52286 194 aa2.88□□□□□ -1.95
RIF1YBR275C UBA2P52488 636 aa2.88□□□□□ -1.95
RIF1YBR275C LSC2P53312 427 aa2.88□□□□□ -1.95
RIF1YBR275C MOT3P54785 490 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C RPT6Q01939 405 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C YMR210WQ03649 449 aa2.88□□□□□ -1.95
RIF1YBR275C ENT5Q03769 411 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C TAF11Q04226 346 aa2.88□□□□□ -1.95
RIF1YBR275C YDR109CQ04585 715 aa2.88□□□□□ -1.95
RIF1YBR275C GUP2Q08929 609 aa2.88□□□□□ -1.95
RIF1YBR275C YIG1Q08956 461 aa2.88□□□□□ -1.95
RIF1YBR275C HRT3Q12347 344 aa2.88□□□□□ -1.95
RIF1YBR275C RPS3P05750 240 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C PPR1P07272 904 aaPredicted RBP2.88□□□□□ -1.95
RIF1YBR275C GLN4P13188 809 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C HYM1P32464 399 aa2.88□□□□□ -1.95
RIF1YBR275C TAF14P35189 244 aa2.88□□□□□ -1.95
RIF1YBR275C SET5P38890 526 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C PAC10P48363 199 aa2.88□□□□□ -1.95
RIF1YBR275C REG1Q00816 1014 aa2.88□□□□□ -1.95
RIF1YBR275C YPL067CQ02754 198 aa2.88□□□□□ -1.95
RIF1YBR275C ERB1Q04660 807 aaKnown RBP2.88□□□□□ -1.95
RIF1YBR275C NSI1Q12457 570 aa2.88□□□□□ -1.95
RIF1YBR275C RRD2Q12461 358 aa2.88□□□□□ -1.95
RIF1YBR275C YLL067CQ07888 1374 aa2.88□□□□□ -1.95
RIF1YBR275C CYB2P00175 591 aa2.87□□□□□ -1.95
RIF1YBR275C STI1P15705 589 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
RIF1YBR275C PRP21P32524 280 aaPredicted RBP2.87□□□□□ -1.95
RIF1YBR275C TSA1P34760 196 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C VRP1P37370 817 aa2.87□□□□□ -1.95
RIF1YBR275C ZRG8P40021 1076 aa2.87□□□□□ -1.95
RIF1YBR275C YRB2P40517 327 aa2.87□□□□□ -1.95
RIF1YBR275C YIL060WP40519 144 aa2.87□□□□□ -1.95
RIF1YBR275C CAF16P43569 289 aa2.87□□□□□ -1.95
RIF1YBR275C RPS7BP48164 190 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C YGR012WP53206 393 aa2.87□□□□□ -1.95
RIF1YBR275C NOG2P53742 486 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C LSM3P57743 89 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C RSN1Q03516 953 aa2.87□□□□□ -1.95
RIF1YBR275C PRS5Q12265 496 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C MPD2Q99316 277 aa2.87□□□□□ -1.95
RIF1YBR275C FRT1Q99332 602 aa2.87□□□□□ -1.95
RIF1YBR275C PHO5P00635 467 aa2.87□□□□□ -1.95
RIF1YBR275C PDC5P16467 563 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C TMA19P35691 167 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C SDS22P36047 338 aa2.87□□□□□ -1.95
RIF1YBR275C YHR020WP38708 688 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C SGN1P40561 250 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
RIF1YBR275C RFX1P48743 811 aa2.87□□□□□ -1.95
RIF1YBR275C VPS73P53142 486 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C PEX8P53248 589 aa2.87□□□□□ -1.95
RIF1YBR275C TNA1P53322 534 aa2.87□□□□□ -1.95
RIF1YBR275C ARE2P53629 642 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C MRPL50P53724 139 aa2.87□□□□□ -1.95
RIF1YBR275C CRN1Q06440 651 aa2.87□□□□□ -1.95
RIF1YBR275C ADF1Q2V2Q1 113 aa2.87□□□□□ -1.95
RIF1YBR275C YLR419WQ06698 1435 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C TCB3Q03640 1545 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C MET16P18408 261 aaPredicted RBP2.87□□□□□ -1.95
RIF1YBR275C PPG1P32838 368 aa2.87□□□□□ -1.95
RIF1YBR275C YND1P40009 630 aa2.87□□□□□ -1.95
RIF1YBR275C VRG4P40107 337 aa2.87□□□□□ -1.95
RIF1YBR275C INP51P40559 946 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C YJR124CP47159 448 aa2.87□□□□□ -1.95
RIF1YBR275C COG7P53195 279 aa2.87□□□□□ -1.95
RIF1YBR275C SNU56Q03782 492 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C VPS20Q04272 221 aa2.87□□□□□ -1.95
RIF1YBR275C LEA1Q08963 238 aaPredicted RBP2.87□□□□□ -1.95
RIF1YBR275C TAF3Q12297 353 aa2.87□□□□□ -1.95
RIF1YBR275C ERP4Q12450 207 aa2.87□□□□□ -1.95
RIF1YBR275C PCL9Q12477 304 aa2.87□□□□□ -1.95
RIF1YBR275C ARG81P05085 880 aa2.87□□□□□ -1.95
RIF1YBR275C TUB3P09734 445 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C SEC15P22224 910 aa2.87□□□□□ -1.95
RIF1YBR275C SRX1P36077 127 aa2.87□□□□□ -1.95
RIF1YBR275C MUD2P36084 527 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C VPS24P36095 224 aaKnown RBP2.87□□□□□ -1.95
RIF1YBR275C EXO5P38289 585 aa2.87□□□□□ -1.95
RIF1YBR275C NEM1P38757 446 aa2.87□□□□□ -1.95
RIF1YBR275C SKN7P38889 622 aa2.87□□□□□ -1.95
RIF1YBR275C NRK1P53915 240 aa2.87□□□□□ -1.95
RIF1YBR275C ARG5,6Q01217 863 aa2.87□□□□□ -1.95
RIF1YBR275C FDC1Q03034 503 aa2.87□□□□□ -1.95
RIF1YBR275C PRP11Q07350 266 aaPredicted RBP2.87□□□□□ -1.95
RIF1YBR275C ISA1Q07821 250 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms