RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-215	ENST00000641371	SBF1	O95248	1867 aa		11.12	□□□□□ -0.63
PHGDH-215	ENST00000641371	PITPNM2	Q9BZ72	1349 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	ZBTB5	O15062	677 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	GH2	P01242	217 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	MRPL12	P52815	198 aa	Known RBP	11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	RASSF7	Q02833	373 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	NR5A1	Q13285	461 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	SEPT2	Q15019	361 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	ZRSR1	Q15695	479 aa	Known RBP	11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	NPY5R	Q15761	445 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	RESP18	Q5W5W9	173 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	BTNL9	Q6UXG8	535 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	FAM160B2	Q86V87	743 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	ENGASE	Q8NFI3	743 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	ZBTB21	Q9ULJ3	1066 aa		11.11	□□□□□ -0.63
PHGDH-215	ENST00000641371	SMCO2	A6NFE2	343 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371		F5H6K3	240 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371		M0R2N6	131 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	NR1I2	O75469	434 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	BMP3	P12645	472 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	CAP2	P40123	477 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	SYK	P43405	635 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	TOB1	P50616	345 aa	Predicted RBP	11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	ADCY7	P51828	1080 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	ATP2C1	P98194	919 aa	Predicted RBP	11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	KLRC3	Q07444	240 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	RASA3	Q14644	834 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	NONO	Q15233	471 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	ARHGAP27	Q6ZUM4	889 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	REXO1	Q8N1G1	1221 aa	Known RBP	11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	NLGN2	Q8NFZ4	835 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	OXER1	Q8TDS5	423 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	CHURC1	Q8WUH1	139 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	SDF4	Q9BRK5	362 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	MTMR7	Q9Y216	660 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	HPSE	Q9Y251	543 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	GJA3	Q9Y6H8	435 aa		11.1	□□□□□ -0.63
PHGDH-215	ENST00000641371	ATAD5	Q96QE3	1844 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	UBE2Q2L	H0YL09	131 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	CTNND1	O60716	968 aa	Known RBP	11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	GOLGA8H	P0CJ92	632 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	FDX1	P10109	184 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	LMOD1	P29536	600 aa	Predicted RBP	11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	TXLNA	P40222	546 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	PRPH	P41219	470 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	SNW1	Q13573	536 aa	Known RBP	11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	NBPF9	Q3BBW0	867 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	PIK3AP1	Q6ZUJ8	805 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	HOMER1	Q86YM7	354 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	ADGRF4	Q8IZF3	695 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	LPAR1	Q92633	364 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	CUL5	Q93034	780 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	PIGS	Q96S52	555 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	FUCA2	Q9BTY2	467 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	NAT10	Q9H0A0	1025 aa	Known RBP	11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	JMJD4	Q9H9V9	463 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	GPCPD1	Q9NPB8	672 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	RIC8A	Q9NPQ8	531 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	ANO10	Q9NW15	660 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	GPRC5D	Q9NZD1	345 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	PGAP2	Q9UHJ9	254 aa		11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.09	□□□□□ -0.63
PHGDH-215	ENST00000641371	hCG_1642624	A0A1W2PR95	340 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	ZNF202	O95125	648 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	GDF11	O95390	407 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	NDUFB10	O96000	172 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	PFKFB1	P16118	471 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	GCFC2	P16383	781 aa	Known RBP	11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	MARCKS	P29966	332 aa	Predicted RBP	11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	LONP1	P36776	959 aa	Known RBP	11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	STAT2	P52630	851 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	USP14	P54578	494 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	CCDC173	Q0VFZ6	552 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	SEMA3F	Q13275	785 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	AP3B2	Q13367	1082 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	STX1A	Q16623	288 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	SUPT20HL1	Q3ZLR7	823 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	SYDE2	Q5VT97	1194 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	GAS2L3	Q86XJ1	694 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	AK8	Q96MA6	479 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	AMN	Q9BXJ7	453 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	ZNF341	Q9BYN7	854 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	TMEM39B	Q9GZU3	492 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	VCPKMT	Q9H867	229 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	AS3MT	Q9HBK9	375 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	FBXO2	Q9UK22	296 aa	Predicted RBP	11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	FEM1B	Q9UK73	627 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	PCDHA6	Q9UN73	950 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	PCDHB6	Q9Y5E3	794 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	PCDHA8	Q9Y5H6	950 aa		11.08	□□□□□ -0.64
PHGDH-215	ENST00000641371	DOCK1	Q14185	1865 aa		11.07	□□□□□ -0.64
PHGDH-215	ENST00000641371	FAM196B	A6NMK8	535 aa		11.07	□□□□□ -0.64
PHGDH-215	ENST00000641371	FOS	P01100	380 aa	Predicted RBP	11.07	□□□□□ -0.64
PHGDH-215	ENST00000641371	XRCC6	P12956	609 aa	Known RBP eCLIP	11.07	□□□□□ -0.64	5e-6	■■□□□ 11.5

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