RNA–Protein interactions for RNA: ENST00000640231.1

ELP4-222, Transcript of elongator acetyltransferase complex subunit 4, human

TSL 5 BASIC

Gene ELP4, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELP4-222	ENST00000640231	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	MAD2L2	Q9UI95	211 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	PALM3	A6NDB9	673 aa	Predicted RBP	13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	TULP2	O00295	520 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	ZNF18	P17022	549 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	ALDH1B1	P30837	517 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	PTPN14	Q15678	1187 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	STYK1	Q6J9G0	422 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	PIK3AP1	Q6ZUJ8	805 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	NYAP1	Q6ZVC0	841 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	IQUB	Q8NA54	791 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	CCDC112	Q8NEF3	446 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	CCDC148	Q8NFR7	591 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	C16orf45	Q96MC5	204 aa	Predicted RBP	13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	GPR101	Q96P66	508 aa	Predicted RBP	13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	TMEM47	Q9BQJ4	181 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	SUGT1	Q9Y2Z0	365 aa		13.59	□□□□□ -0.23
ELP4-222	ENST00000640231	GAK	O14976	1311 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	USP17L3	A6NCW0	530 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	USP17L4	A6NCW7	530 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	DPEP1	P16444	411 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	LONP1	P36776	959 aa	Known RBP	13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	CDK8	P49336	464 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	CFAP100	Q494V2	611 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	CEP135	Q66GS9	1140 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	USP17L1	Q7RTZ2	530 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	POLL	Q9UGP5	575 aa		13.58	□□□□□ -0.24
ELP4-222	ENST00000640231	PPEF1	O14829	653 aa	Predicted RBP	13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	CCP110	O43303	1012 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	CTIF	O43310	598 aa	Known RBP	13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	KCNA3	P22001	575 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	DPYD	Q12882	1025 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	NOM1	Q5C9Z4	860 aa	Known RBP	13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	GRAMD1C	Q8IYS0	662 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	STAG2	Q8N3U4	1231 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	C4orf32	Q8N8J7	132 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	DPF2	Q92785	391 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231		A0A087X0B3	334 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	VWA3A	A6NCI4	1184 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231		M0R2N6	131 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	WNT7A	O00755	349 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	VEGFA	P15692	232 aa	Predicted RBP	13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	NOV	P48745	357 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	RHBDL3	P58872	404 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	TGFB2	P61812	414 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	SYCP1	Q15431	976 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	MFSD14B	Q5SR56	506 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	SPZ1	Q9BXG8	430 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	SAP30BP	Q9UHR5	308 aa	Known RBP	13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	NFE2L3	Q9Y4A8	694 aa		13.57	□□□□□ -0.24
ELP4-222	ENST00000640231	CCDC66	A2RUB6	948 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	C6orf229	H3BNL8	230 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	TOP1	P11387	765 aa	Known RBP	13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	FMR1	Q06787	632 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	SPATA1	Q5VX52	437 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	CNKSR1	Q969H4	720 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	EYA3	Q99504	573 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	COA1	Q9GZY4	146 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	TMX1	Q9H3N1	280 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	BARHL2	Q9NY43	387 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	CD2AP	Q9Y5K6	639 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	SLX4	Q8IY92	1834 aa		13.56	□□□□□ -0.24
ELP4-222	ENST00000640231	CCDC194	A0A1B0GVG4	234 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	TBX2	Q13207	712 aa	Predicted RBP	13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	E2F4	Q16254	413 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	SLC4A8	Q2Y0W8	1093 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	EFCC1	Q9HA90	598 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	ATP6V0A2	Q9Y487	856 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	LRRC37A	A6NMS7	1700 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	FLT1	P17948	1338 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	KLRF2	D3W0D1	207 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	STXBP3	O00186	592 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	LAD1	O00515	517 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	GTPBP6	O43824	516 aa	Predicted RBP	13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	MCM7	P33993	719 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	AFM	P43652	599 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	FCHSD1	Q86WN1	690 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	CEP120	Q8N960	986 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	SLC44A5	Q8NCS7	719 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	PCDHA6	Q9UN73	950 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	STX8	Q9UNK0	236 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	PCDHA8	Q9Y5H6	950 aa		13.55	□□□□□ -0.24
ELP4-222	ENST00000640231	USP27X	A6NNY8	438 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	CYTH3	O43739	400 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	PARP1	P09874	1014 aa	Known RBP	13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	TXLNA	P40222	546 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	SEMA3F	Q13275	785 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	CUL4B	Q13620	913 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	IL17A	Q16552	155 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	SLC35G1	Q2M3R5	365 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	E4F1	Q66K89	784 aa	Predicted RBP	13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	WWC2	Q6AWC2	1192 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	MED15	Q96RN5	788 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	PDXDC2P	Q6P474	469 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	TTLL6	Q8N841	843 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	KIF18A	Q8NI77	898 aa		13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	TRMT1	Q9NXH9	659 aa	Known RBP	13.54	□□□□□ -0.24
ELP4-222	ENST00000640231	NAV1	Q8NEY1	1877 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms