RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 SH3GLB2Q9NR46 395 aa21.33■■□□□ 1
CLN5-219ENST00000637537 MDM2Q00987 491 aaPredicted RBP21.32■■□□□ 1
CLN5-219ENST00000637537 SPZ1Q9BXG8 430 aa21.32■■□□□ 1
CLN5-219ENST00000637537 TDRD3Q9H7E2 651 aaKnown RBP21.32■■□□□ 1
CLN5-219ENST00000637537 PCDHA6Q9UN73 950 aa21.32■■□□□ 1
CLN5-219ENST00000637537 PCDHA8Q9Y5H6 950 aa21.32■■□□□ 1
CLN5-219ENST00000637537 DHX58Q96C10 678 aa21.32■■□□□ 1
CLN5-219ENST00000637537 IGKV6D-41A0A0C4DH26 115 aa21.31■■□□□ 1
CLN5-219ENST00000637537 M0R2N6 131 aa21.31■■□□□ 1
CLN5-219ENST00000637537 BAG6P46379 1132 aa21.31■■□□□ 1
CLN5-219ENST00000637537 ATP2C1P98194 919 aaPredicted RBP21.31■■□□□ 1
CLN5-219ENST00000637537 SH3BP5LQ7L8J4 393 aa21.31■■□□□ 1
CLN5-219ENST00000637537 GPCPD1Q9NPB8 672 aa21.31■■□□□ 1
CLN5-219ENST00000637537 PLIN4Q96Q06 1357 aa21.31■■□□□ 1
CLN5-219ENST00000637537 NAPAP54920 295 aa21.31■■□□□ 1
CLN5-219ENST00000637537 IL17AQ16552 155 aa21.31■■□□□ 1
CLN5-219ENST00000637537 INF2Q27J81 1249 aa21.31■■□□□ 1
CLN5-219ENST00000637537 LZTS2Q9BRK4 669 aa21.31■■□□□ 1
CLN5-219ENST00000637537 SWAP70Q9UH65 585 aa21.31■■□□□ 1
CLN5-219ENST00000637537 ZNF646O15015 1829 aaPredicted RBP21.31■■□□□ 1
CLN5-219ENST00000637537 TTLL1O95922 423 aa21.3■■□□□ 1
CLN5-219ENST00000637537 BMP6P22004 513 aa21.3■■□□□ 1
CLN5-219ENST00000637537 POSTNQ15063 836 aa21.3■■□□□ 1
CLN5-219ENST00000637537 RRP36Q96EU6 259 aaKnown RBP21.3■■□□□ 1
CLN5-219ENST00000637537 CCDC194A0A1B0GVG4 234 aa21.3■■□□□ 1
CLN5-219ENST00000637537 ACTN4O43707 911 aaKnown RBP21.3■■□□□ 1
CLN5-219ENST00000637537 DPEP1P16444 411 aa21.3■■□□□ 1
CLN5-219ENST00000637537 PTGS1P23219 599 aa21.3■■□□□ 1
CLN5-219ENST00000637537 NCBP1Q09161 790 aaKnown RBP21.3■■□□□ 1
CLN5-219ENST00000637537 TTLL6Q8N841 843 aa21.3■■□□□ 1
CLN5-219ENST00000637537 RAD21O60216 631 aa21.29■■□□□ 1
CLN5-219ENST00000637537 RAD17O75943 681 aa21.29■■□□□ 1
CLN5-219ENST00000637537 CASP1P29466 404 aa21.29■■□□□ 1
CLN5-219ENST00000637537 CDC25AP30304 524 aa21.29■■□□□ 1
CLN5-219ENST00000637537 CCDC148Q8NFR7 591 aa21.29■■□□□ 1
CLN5-219ENST00000637537 FERMT2Q96AC1 680 aa21.29■■□□□ 1
CLN5-219ENST00000637537 PRMT6Q96LA8 375 aaPredicted RBP21.29■■□□□ 1
CLN5-219ENST00000637537 ZNF277Q9NRM2 450 aaPredicted RBP21.29■■□□□ 1
CLN5-219ENST00000637537 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
CLN5-219ENST00000637537 FKBP1AP62942 108 aaKnown RBP21.29■■□□□ 1
CLN5-219ENST00000637537 CCDC186Q7Z3E2 898 aa21.29■■□□□ 1
CLN5-219ENST00000637537 SERPINA10Q9UK55 444 aa21.29■■□□□ 1
CLN5-219ENST00000637537 GOLGA6L6A8MZA4 724 aa21.28■■□□□ 1
CLN5-219ENST00000637537 KCNA3P22001 575 aa21.28■■□□□ 1
CLN5-219ENST00000637537 TRAPPC10P48553 1259 aa21.28■■□□□ 1
CLN5-219ENST00000637537 CFAP100Q494V2 611 aa21.28■■□□□ 1
CLN5-219ENST00000637537 TTBK2Q6IQ55 1244 aa21.28■■□□□ 1
CLN5-219ENST00000637537 SMCO2A6NFE2 343 aa21.28■■□□□ 1
CLN5-219ENST00000637537 BMP15O95972 392 aa21.28■■□□□ 1
CLN5-219ENST00000637537 AFMP43652 599 aa21.28■■□□□ 1
CLN5-219ENST00000637537 MRIQ9BWK5 157 aa21.28■■□□□ 1
CLN5-219ENST00000637537 C10orf71Q711Q0 1435 aa21.28■■□□□ 1
CLN5-219ENST00000637537 SLC16A2P36021 539 aa21.27■■□□□ 1
CLN5-219ENST00000637537 GABPB1Q06547 395 aaPredicted RBP21.27■■□□□ 1
CLN5-219ENST00000637537 NCAPHQ15003 741 aa21.27■■□□□ 1
CLN5-219ENST00000637537 SARM1Q6SZW1 724 aa21.27■■□□□ 1
CLN5-219ENST00000637537 COA7Q96BR5 231 aa21.27■■□□□ 1
CLN5-219ENST00000637537 IDI2Q9BXS1 227 aa21.27■■□□□ 1
CLN5-219ENST00000637537 ZMYND12Q9H0C1 365 aa21.27■■□□□ 1
CLN5-219ENST00000637537 SIPA1L1O43166 1804 aa21.27■■□□□ 1
CLN5-219ENST00000637537 HDLBPQ00341 1268 aaKnown RBP21.27■■□□□ 1
CLN5-219ENST00000637537 KCTD1Q719H9 257 aa21.27■■□□□ 1
CLN5-219ENST00000637537 STAMQ92783 540 aa21.27■■□□□ 1
CLN5-219ENST00000637537 CCDC144BQ3MJ40 725 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 CC2D2BQ6DHV5 1058 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 C4orf32Q8N8J7 132 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 SUPT20HQ8NEM7 779 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 BBXQ8WY36 941 aaPredicted RBP21.26■□□□□ 0.99
CLN5-219ENST00000637537 BPIFA3Q9BQP9 254 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 RIOX1Q9H6W3 641 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 MAN1B1Q9UKM7 699 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 ZBTB12Q9Y330 459 aaPredicted RBP21.26■□□□□ 0.99
CLN5-219ENST00000637537 SNHG28P0DPA3 235 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 LMOD1P29536 600 aaPredicted RBP21.26■□□□□ 0.99
CLN5-219ENST00000637537 DAGLBQ8NCG7 672 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 EHD4Q9H223 541 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 TMEM60Q9H2L4 133 aa21.26■□□□□ 0.99
CLN5-219ENST00000637537 SRCAPQ6ZRS2 3230 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 MYH4Q9Y623 1939 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 GDF11O95390 407 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 LRMPQ12912 555 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 CERKLQ49MI3 558 aaPredicted RBP21.25■□□□□ 0.99
CLN5-219ENST00000637537 CCDC93Q567U6 631 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 LARGE2Q8N3Y3 721 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 DHX36Q9H2U1 1008 aaKnown RBP21.25■□□□□ 0.99
CLN5-219ENST00000637537 BIN2Q9UBW5 565 aaPredicted RBP21.25■□□□□ 0.99
CLN5-219ENST00000637537 MORC2Q9Y6X9 1032 aaPredicted RBP21.25■□□□□ 0.99
CLN5-219ENST00000637537 ZBTB7AO95365 584 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 ASPRV1Q53RT3 343 aa21.25■□□□□ 0.99
CLN5-219ENST00000637537 HOOK1Q9UJC3 728 aaKnown RBP21.25■□□□□ 0.99
CLN5-219ENST00000637537 COL4A5P29400 1685 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 ATP1A3P13637 1013 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 ZNF543Q08ER8 600 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 CCDC96Q2M329 555 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 SMARCE1Q969G3 411 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 HSD3B7Q9H2F3 369 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 TMEM260Q9NX78 707 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 MYO3BQ8WXR4 1341 aa21.24■□□□□ 0.99
CLN5-219ENST00000637537 CLRN2A0PK11 232 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms